Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq49 518 4e-142 seq277 120 4e-22 seq56 93.3 5e-14 >seq49 Length=1117640 Score = 518 bits (574), Expect = 4e-142 Identities = 1322/1995 (66%), Gaps = 29/1995 (1%) Strand=Plus/Minus Query 62243 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 62302 |||||||||||| | || || | | ||||| ||||| || ||||| | | ||| Sbjct 732504 CTGAATGGATCCGTTGTGAGCGATCAGCTGGTTCTTCATCTCCTCGTTCCACAGTCCTCT 732445 Query 62303 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 62362 ||| || | || | || ||||| || || || | ||||| ||||| |||| || || Sbjct 732444 CTCCGTCAGGTCTTTGAGCAGATGAGGGTTGACGATCTGAAACTCTCCCGACAGAACCCT 732385 Query 62363 CCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGC 62422 || ||||| || || ||||| || | ||| | ||||| || || |||| || || || Sbjct 732384 GCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGC 732325 Query 62423 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 62482 || || || || ||||| || |||| || | || || || | || | | | ||| Sbjct 732324 GGTGGAGGCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGAT 732265 Query 62483 TTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNN 62542 ||| || || || | | ||| | ||| ||||| | ||| | | Sbjct 732264 TTTCTCCTTCAGCAGCTTCCAGTCCCAGAGATCGGTCGG--CGTCTTCTCCCACATGTCG 732207 Query 62543 T--TGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTC 62600 | || || || || || ||| | || || | || || ||||| || || || Sbjct 732206 TACTGCAGGATGCCCTTGCTGACCGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAGCTCG 732147 Query 62601 TCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTA 62660 | || || || || |||||||| | || |||| ||||||||||||||||| | | Sbjct 732146 GCCGCCAGCTCGCAGCTCGCCTCCAGAGCGGCGTAGTAAATGGTTTCGAAGATGTGGATG 732087 Query 62661 TTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCT 62720 || || ||| || || |||| ||||| || | | | |||||| || ||||| ||| Sbjct 732086 TTGAGCAGTTGAGCCTCTGGGCTTTCAAACGGGTGACGCATGAGAATGAAGGCGTCGGCT 732027 Query 62721 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGA 62780 || || || || || || ||||| || || || | ||| || ||| | || ||||| || Sbjct 732026 AAACCCTGGACTCCGATTCCGATCGGCCTGTGGCGCTTGTTCGAGTTCTCGGCTTCCGGT 731967 Query 62781 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACA 62840 | || || || || || || ||||| || || || ||| |||| ||||||||| |||| Sbjct 731966 ACCGGGTAGTAGTTGATCTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTCACA 731907 Query 62841 TCCTTCAGTTTGAGAAAATCAAATCGCCCATCT---ATTACAAACATGTTCAAGGCAACA 62897 | |||||| ||||||||| || ||| | || ||||||| | ||| | Sbjct 731906 TATGCCAGTTTCTTAAAATCAAAAGTCCGCTCTGGGGTGACGTACATGTTGAGGGCGATG 731847 Query 62898 GATGCCAGATTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGC 62955 || ||||| ||||| || |||||||| | | || | |||| | || || |||| Sbjct 731846 GAGGCCAGGTTACAGACCGCTACCTCGTCCTTGC--TGGTGTATTCAACAATTTCGGTGC 731789 Query 62956 AAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCAT 63015 | || || || ||||| || || || | ||| || || || ||||| |||| || || | Sbjct 731788 ACAGGTTGCTGCACTTTATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGT 731729 Query 63016 CCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 63075 | || || || ||| |||| || ||||| || |||| || || || || || | ||| | Sbjct 731728 CTTTGTACAGCATGTATGGCGTTCCAGTCTCTGTCTGCGACTCAATGATGGCGTACCACA 731669 Query 63076 -CGACTCGAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTTTCGTA--TAGTGTATAC 63131 | || ||||||| | | | | || | | || | || | || || | ||||| | Sbjct 731668 GCTGCT-GAGCCTTCACCACACGCTTGGCCTTGCCCTCCT-TCTCATACCTGGTGTAGAG 731611 Query 63132 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 63191 || || ||||| || ||||| | |||| ||||| || | | ||||||||| Sbjct 731610 CTTC--TCAAACTCCTCCCCCCAGCACTCATCCAGACCAGGGCAGGCGTTGGGACACATC 731553 Query 63192 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 63250 | ||||| || || || ||||| ||||| || |||||||| ||||| | || Sbjct 731552 AGAGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAACAGATCAGGGATCCACATGGCG 731493 Query 63251 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310 || ||| || ||||||| || || ||||| |||||||| ||||| || || || ||||| Sbjct 731492 TAGAAA-AGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAA 731434 Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370 | | | ||| | ||||| || || | ||| ||||| | |||| || | ||||| Sbjct 731433 GTCGAACACGTCAAAGTGCCAGGGCTCTAGGTACATGGCGAAGGCTCCGGGTCTCTTGTT 731374 Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 || ||||| || | ||| | || ||||| || |||||||||| ||| || | | || Sbjct 731373 GCCCCCCTGGTCGACGTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCC 731314 Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63490 ||| || | || ||||| || ||||| ||||| || | | | || || | | Sbjct 731313 GTTGGAGTTTCCGTTGGTGCCAGAGATGTAGCTCCCTGTAGATCTGATGCAGCTGACCGC 731254 Query 63491 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63550 | ||| || || || || || ||||| | || || | || | |||||| ||||| Sbjct 731253 CACACCGATGCCTCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCGTAGAT 731194 Query 63551 ACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63610 || || ||||| || || ||||| || || || ||||| |||| || | | | Sbjct 731193 GCCTTCAATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGAGGCCTGTT 731134 Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670 || || || || || | || || || ||||| || ||||| || || || || || || Sbjct 731133 GGTCCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAACCACTTCTCTGACAGCAGGTT 731074 Query 63671 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63730 ||| |||||||| |||| || |||||| | || |||||||| | ||| | ||| | Sbjct 731073 GTAGGTCTCAATCGCTGCATCGATATCCGTCTTGTGGATTCCTACAGAGACTCTCATGAG 731014 Query 63731 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63790 ||||||||| |||| || | | ||| ||| || |||| || ||| || |||| Sbjct 731013 CATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTACGAACGCTCCAG 730954 Query 63791 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850 ||| || || || || ||||||| || || ||||| ||||| || || ||||||||| Sbjct 730953 AGTCTTGAAGCCGAAGAAGTTGTAGGAGAAATCTCGGTCGTAGATTATGGACGAGTTGAG 730894 Query 63851 TTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATGTT 63909 | || || | || ||| || || | || | ||| || || || || || || Sbjct 730893 TCGGTCTTTGTTTTCTAGAACGATGTCAAGCGT-CTCCTTGGAGATCATAGGTGA--GTG 730837 Query 63910 TCCCATTTTTA--GGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 63967 | | || | || || | |||||| | | ||||||||||| || || || | ||| Sbjct 730836 GCGTTTGTTCAGGGGGTTGATGTAGTTGTACAGGTCCTCCATCACGTCGCTGAACACTTT 730777 Query 63968 ttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGG 64027 || || || ||||| || || || ||||| || | || || || ||||| || || || Sbjct 730776 CTTAGTCTCTTTGTGCAGGTTGGAGACGGCGATCCGAGCAGCGAGGATGGCGTAGTCGGG 730717 Query 64028 ATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGT 64087 |||| || || ||||| || || || |||||||| ||||| | || || || || Sbjct 730716 GTGTTTAGTTGTGAGCGTGGCAGCGATCTCTGCTGCCAGCGTGTCGAGCTCCACAGTGGT 730657 Query 64088 TACTCCATTATATATTCCTTGAATAACCTTCATAGCTATTTTAATAGGATCTATATGATC 64147 ||||| | || | || || || |||||||| | || | || || | | || Sbjct 730656 GACTCCGCTGTACAGACCCTGGATCACCTTCATGGTGATCTGGGCCGGGTCCACAAAGTC 730597 Query 64148 CGTGTTTAAGCCATAACATAATTTTCT-AATACGAGACGTGATTTTATCAAACATGACAT 64206 | ||| | || || || || |||| || ||||| |||||||| || |||||||| Sbjct 730596 AGAGTTCAGCCCGTAGCA-AAGCTTCTGGATGCGAGAGGTGATTTTGTCGAACATGACGC 730538 Query 64207 TTTCCTTGTATCCAT 64221 ||||| | ||||| Sbjct 730537 GTTCCTGGCGTCCAT 730523 >seq277 Length=566994 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||||||||| || || || |||||||| || || || |||||||| ||||| | ||| | Sbjct 257392 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 257333 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| || |||| |||||| || ||||| ||||||||||| || || ||||| |||| Sbjct 257332 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGG 257273 Query 33446 CAATAAGTCTCTCTCC 33461 | | || | |||||| Sbjct 257272 CCACAACACGCTCTCC 257257 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||||||||| || || || |||||||| || || || |||||||| ||||| | ||| | Sbjct 272204 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 272263 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| || |||| |||||| || ||||| ||||||||||| || || ||||| |||| Sbjct 272264 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGG 272323 Query 33446 CAATAAGTCTCTCTCC 33461 | | || | |||||| Sbjct 272324 CCACAACACGCTCTCC 272339 >seq56 Length=1093683 Score = 93.3 bits (102), Expect = 5e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 63955 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 64014 |||| || | ||| || ||||| ||||| || || || || || || | || || || | Sbjct 338076 CACTGAACACTTTCTTGGTTTCTTTGTGCAGGTTAGAAACTGCGATCCGTGCAGCCAGGA 338135 Query 64015 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64074 | ||||| || ||||||| || || ||||| ||| | || |||||||||||||||| Sbjct 338136 TTGCATAGTCAGGATGTTTAGTGGTGAGGGTGGCCGCTGTCTCTGCTGCCAGAGTGTCCA 338195 Query 64075 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64120 || || || || |||||| | || | || || || |||||||| Sbjct 338196 GCTCCACAGTGGTGACTCCACTGTACAGACCCTGGATCACCTTCAT 338241 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121 |||| || || || ||||| || || |||||| ||| | || || || |||||||||| Sbjct 334328 TCCAACCATAGAAGTGCATGCTGGTCAGTTTGCCATAGTTTGGCTCAGCAATATGGATAT 334387 Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181 | | ||| || || || || ||| |||| || | ||||| ||||| || | | |||| Sbjct 334388 TTAGAGACTGGCTCTGGTCAATGTAGGCACCGCGATCTGCCGCCATCTTGAGAACTGTCT 334447 Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 62230 | || | |||||||| | |||||||| |||| |||| | ||| || || Sbjct 334448 TCTGGGAGATTTCCCAGACTGTTTTATACAACT-GCTTCAGATCATCGGG 334496 Score = 84.2 bits (92), Expect = 3e-11 Identities = 125/177 (71%), Gaps = 3/177 (2%) Strand=Plus/Plus Query 62600 CTCAGCT---AGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTT 62656 ||||||| ||||||||||| ||||| | || |||| || ||||| || ||||||| Sbjct 335248 CTCAGCTGCCAGTTCACAACTGGCCTCCAGAGCGGCGTAGTAGATGGTCTCAAAGATCTG 335307 Query 62657 CTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTC 62716 | || || || || || |||| |||||||||||| | || || || || || Sbjct 335308 AATGTTGAGTAACTGGGCCTCTGGGCTTTCAAATGGATAACGCATAAGGATGAAGGCATC 335367 Query 62717 CGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGC 62773 || | ||| || ||||| || || || || || || | ||| ||||| ||||||| Sbjct 335368 AGCCAGTCCCTGCACACCGATTCCAATTGGCCTGTGACGCTTGTTAGAATTTTCAGC 335424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622710371048240