Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq49 208 2e-48 >seq49 Length=1117640 Score = 208 bits (230), Expect = 2e-48 Identities = 575/869 (66%), Gaps = 18/869 (2%) Strand=Plus/Plus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 || || |||||||| ||| | ||| | || || | || ||||| ||||| | ||| Sbjct 730996 GAGCGACCGCAGCACATGCTCATGAGAGTCTCTGTAGGAATCCACAAGACGGATATCGAT 731055 Query 363508 GCCGCGATTGAAACATATAAGCTTCTA--AGTGCTCGTGTATTCACGCACGCCACGCCAA 363565 || |||||||| || || || || || || | ||| ||||| |||||| | || | Sbjct 731056 GCAGCGATTGAGACCTACAACCTGCTGTCAGAGAA-GTGG-TTCACCCACGCCTCCCCGA 731113 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | | | ||| ||||| || | || ||| |||| ||||| || || |||| Sbjct 731114 CTCTCTTCAACGCTGGGACCAACAGGCCTCAGCTGTCCAGCTGCTTCCTGCTCGCCATGA 731173 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 ||||||| ||| || || |||| ||||| || ||| | ||||| || || |||||| Sbjct 731174 AGGACGACAGCATTGAAGGCATCTACGACACGCTGAAGCAGTGTGCCCTCATCTCCAAGT 731233 Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC 363744 || || || || ||||| || || | | | | |||| || ||||| Sbjct 731234 CAGCTGGAGGCATCGGTGTGGCGGTCAGCTGCATCAGATCTACAGGG-AGCTACATCTCT 731292 Query 363745 GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804 ||||| ||| |||| || ||||| || |||||||| | || | |||| || || Sbjct 731293 GGCACCAACGGAAACTCCAACGGGCTCGTCCCCATGCTGAGAGTTTACAACAACACGGCA 731352 Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864 | |||||||||||||| || ||| | || || || || ||||| || ||||| Sbjct 731353 CGCTACGTCGACCAGGGGGGCAACAAGAGACCCGGAGCCTTCGCCATGTACCTAGAGCCC 731412 Query 363865 CATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTG 363924 || || | || || || || ||||| ||| ||||| ||||| ||||| | Sbjct 731413 TGGCACTTTGACGTGTTCGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGAGGAGCAG 731472 Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984 | || | || || ||||| || | ||| | |||| | || |||||| | |||||| Sbjct 731473 AGGGCCAGAGACCTTTTCTACGCCATGTGGATCCCTGATCTGTTCATGAAGAGAGTGGAG 731532 Query 363985 -GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043 ||| | || | |||| || | || || ||| || || ||||| || || Sbjct 731533 AGCAACCAGGACT-GGTCTCTGATGTGTCCCAACGCCTGCCCTGGTCTGGATGAGTGCTG 731591 Query 364044 GGGTGACGACTATGTT--GCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT---CGT 364098 ||| || || | || |||||| || | |||||| |||||| ||||| ||| Sbjct 731592 GGGGGAGGAGTTTGAGAAGCTCTACACCAG--GTATGAGAAGGAGGGCAAGGCCAAGCGT 731649 Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 | | || ||| |||| |||| |||||||| || ||||||| ||||| ||| Sbjct 731650 GTGGTGAAG---GCTCAGCAGCTGTGGTACGCCATCATTGAGTCGCAGACAGAGACTGGA 731706 Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218 || || || ||| |||||||||| | |||||| | ||| |||||||||| | || || Sbjct 731707 ACGCCATACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGC 731766 Query 364219 ACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACT 364278 || || || |||||||| || ||||| ||| ||||||||||| |||||| Sbjct 731767 ACCATAAAGTGCAGCAACCTGTGCACCGAAATTGTTGAATACACCAGCAAGGACGAGGTA 731826 Query 364279 GCCGTATGTAACCTTGCGTCGATCGCGCT 364307 || || |||||||| || || ||||| || Sbjct 731827 GCGGTCTGTAACCTGGCCTCCATCGCCCT 731855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302845709983748