Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq365 111 1e-19 SEQ16359 102 7e-17 seq1673 95.1 1e-14 seq510 87.8 2e-12 >seq365 Length=500478 Score = 111 bits (122), Expect = 1e-19 Identities = 147/203 (72%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 23986 ACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAG 24044 ||||| ||||| | || || || ||| | ||||| ||| | || ||| |||| || ||| Sbjct 4326 ACAAACATGCAGATCTTCGTCAAGACACTCACTGGTAAAACCATCACCCTCGAGGTTGAG 4267 Query 24045 GCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCC 24104 ||| |||||||| ||| | || ||| ||||| ||||| |||||||| ||||| Sbjct 4266 CCCAGTGACACCATTGAGAATGTGAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCT 4207 Query 24105 GATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGAT 24164 || || ||||| |||| | || || ||||| || ||||||| | | | | || || Sbjct 4206 GACCAGCAGAGGTTGATCTTCGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTCTCTGAC 4147 Query 24165 TATAACATTCAAAAAGAATCTAC 24187 || ||||| ||||||||||| || Sbjct 4146 TACAACATCCAAAAAGAATCCAC 4124 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || ||| | ||||| ||| | || ||| | || || ||| ||| Sbjct 9158 ATGCAGATCTTCGTCAAGACACTCACTGGTAAAACCATCACCCTGGAGGTTGAGCCCAGT 9099 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || ||| ||||| |||||||||||||| || || ||||| Sbjct 9098 GACACCATCGAGAACGTGAAAGCTAAGATCCAGGACAAAGAAGGCATTCCCCCAGATCAG 9039 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | || |||||||| || || || | | | | | || || || ||| Sbjct 9038 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACCCTCTCTGACTACAAC 8979 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || ||||| || Sbjct 8978 ATCCAGAAGGAATCCAC 8962 Score = 93.3 bits (102), Expect = 4e-14 Identities = 166/241 (69%), Gaps = 1/241 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || ||| | ||||| || | || ||| | || || ||| ||| Sbjct 4033 ATGCAGATCTTTGTCAAGACACTCACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 3974 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| ||||| || ||||| || || || || Sbjct 3973 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAG 3914 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | | |||||||| || ||||||| | | | | || || || ||| Sbjct 3913 CAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAAC 3854 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTAT-AATGATT 24229 || || || ||||| || | || | ||| | | |||| || || | || ||||||| Sbjct 3853 ATCCAGAAGGAATCCACCCTCCACCTTGTGCTGCGTCTGAGGGGTGGTCAATAAATGATT 3794 Query 24230 C 24230 | Sbjct 3793 C 3793 Score = 86.0 bits (94), Expect = 5e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | ||||| ||||| | ||||| || | || ||| | || || ||| || Sbjct 9815 AACATGCAGATCTTTGTGAAAACCCTTACTGGCAAGACCATCACCCTAGAGGTGGAGCCC 9756 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 | |||||||| ||| | ||||| || || |||||||||||||| || || || Sbjct 9755 AGTGACACCATTGAGAATGTCAAGGCTAAAATCCAGGACAAAGAAGGCATTCCCCCAGAC 9696 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 || ||||| |||| | || |||||||| || ||||||| Sbjct 9695 CAGCAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAAGATG 9656 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| | || || ||| ||| ||||||||||||| | ||||| ||||| ||| Sbjct 9350 ATCACCCTGGAGGTTGAGCCCAGCGACACCATCGAGAATGTCAAGGCTAAGATCCAGGAC 9291 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 ||||||||||| || || || || ||||| |||| | | |||||||| || ||||| Sbjct 9290 AAAGAAGGCATTCCCCCTGACCAGCAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGAC 9231 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 | | | | | || || || ||||| || || ||||| || Sbjct 9230 GGCCGCACCCTCTCTGACTACAACATCCAGAAGGAATCCAC 9190 >SEQ16359 Length=2539 Score = 102 bits (112), Expect = 7e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | ||||| || || | ||||| ||| | || ||| | || || ||| | Sbjct 2313 CAAGATGCAGATCTTTGTGAAGACCCTGACTGGTAAAACAATCACCCTGGAGGTGGAGCC 2372 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 || ||||||||||||| | || ||| |||||| |||||||||||||| ||||| || Sbjct 2373 CAGCGACACCATCGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGCATCCCTCCTGA 2432 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 || || | ||||| | | || ||||| || ||||||| | | | || ||| || Sbjct 2433 CCAGCAACGTCTGATCTTTGCTGGTAAGCAGCTAGAAGATGGTCGCACCCTCTCCGACTA 2492 Query 24167 TAACATTCAAAAAGAATCTAC 24187 ||||| || || || || || Sbjct 2493 CAACATCCAGAAGGAGTCCAC 2513 >seq1673 Length=142529 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | || ||| | || || ||| ||| | Sbjct 40 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 99 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || ||| |||||| |||||||||||||| ||||| || || Sbjct 100 GACACCATTGAGAATGTGAAAGCAAAGATCCAAGACAAAGAAGGCATCCCTCCTGACCAG 159 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 ||||| ||||| | | || ||||| || ||||||| Sbjct 160 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATG 196 >seq510 Length=807390 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | ||||| || || | ||||| ||| | || ||| | || || ||| | Sbjct 1727 CAAGATGCAGATCTTTGTGAAGACCCTGACTGGTAAAACAATCACCCTGGAGGTGGAGCC 1668 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 || ||||||||||||| | || ||| |||||| |||||||||||||| ||||| || Sbjct 1667 CAGCGACACCATCGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGCATCCCTCCTGA 1608 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACT 24139 || || | ||||| | | || ||||| || Sbjct 1607 CCAGCAACGTCTGATCTTTGCTGGTAAGCAGCT 1575 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | ||||| || || | ||||| ||| | || ||| | || || ||| | Sbjct 4387 CAAGATGCAGATCTTTGTGAAGACCCTGACTGGTAAAACAATCACCCTGGAGGTGGAGCC 4328 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 || ||||||||||||| | || ||| |||||| |||||||||||||| ||||| || Sbjct 4327 CAGCGACACCATCGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGCATCCCTCCTGA 4268 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACT 24139 || || | ||||| | | || ||||| || Sbjct 4267 CCAGCAACGTCTGATCTTTGCTGGTAAGCAGCT 4235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429776635354170