Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq49 239 4e-58 seq56 129 6e-25 SEQ16359 123 2e-23 seq365 120 3e-22 seq1673 114 1e-20 seq510 84.2 2e-11 >seq49 Length=1117640 Score = 239 bits (264), Expect = 4e-58 Identities = 972/1507 (64%), Gaps = 40/1507 (3%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||| ||||||||| || | || || | || || | ||| ||| ||| | Sbjct 732416 TTGACGATCTGAAACTCTCCCGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCT 732357 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || | |||||||| ||||||||||| || ||||| | || |||||||| |||| | Sbjct 732356 TCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGC 732297 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || | || ||| || || ||| | ||||| ||| ||| ||||| Sbjct 732296 AGCAGGCTGTTCCTCACGCCATGTTTGGCGATTTTCTCCTTCAGCAGCTTCCAGTCCCAG 732237 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || |||||| || ||||||||||||||||||| ||||||| |||| | ||| | Sbjct 732236 AGATCGGTCGGCGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACCGGGGAG 732177 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCG--AGCTCGCAACTCGCCTCCAGAG 145355 || | | | ||| ||| || | | || |||||||| ||||||||||||| Sbjct 732176 CCCTCGTACGTCTCGTAGGGGCCG--AGCTCGGCCGCCAGCTCGCAGCTCGCCTCCAGAG 732119 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 || || | ||||| || ||| || || |||||||||| || || ||| || Sbjct 732118 CGGCGTAGTAAATGGTTTCGAAGATGTGGATGTTGAGCAGTTGAGCCTCTGGGCTTTCAA 732059 Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475 |||| |||| || | || || ||||| | ||||| | ||| | ||||| |||| Sbjct 732058 ACGGGTGACGCATGAGAATGAAGGCGTCGGCTAAACCCTGGACTCCGATTCCGATCGGCC 731999 Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCGATA--GGATATCGATTACGGTCGATAAT 145533 || | |||| | | |||| | | || || || || || |||||||| Sbjct 731998 TGTGGCGCTTGTT-CGAGTTCTCGGCTTC-CGGTACCGGGTAGTAGTTGATCTCGATAAT 731941 Query 145534 TTTATTCAAGTTTCGCACTACTACCTTTGTAA--TGTGCCGCAACTTTTCAAAGTCAAAC 145591 || |||| |||| || | ||| || || | | |||| | || | ||| ||||| Sbjct 731940 CTTGTTCAGGTTTTTGACGATTACTTTGGTCACATATGCC--AGTTTCTTAAAATCAAA- 731884 Query 145592 CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCC 145651 || | || | || | | |||| |||||| || |||| ||||| || || Sbjct 731883 --AGTCCGCTCTGGGGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTACAGACCGCT 731826 Query 145652 GTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTT 145711 ||| || | | |||||| || || |||| ||||| ||||| || || ||||| Sbjct 731825 ACCTCGTCCTTGCTGGTGTATTCAACAATTTCGGTGCACAGGTTGCTGCACTTTATGGTG 731766 Query 145712 CCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCG 145771 |||||||| ||||| || || ||||||||||| ||||| ||||| |||||||| || Sbjct 731765 CCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTATGGCGTT 731706 Query 145772 CCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGCACCTGCT 145829 |||||||| ||||| ||| | ||| || || || | ||| || |||| Sbjct 731705 CCAGTCTCTGTCTGCGACTCAATGAT--GGCGTACCACAGCTGCTGAGCCTTCACCACAC 731648 Query 145830 GCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGC 145889 ||| | |||||| | || || | ||||||||| ||||||| | || ||| Sbjct 731647 GCTTGGCCTTGCCCTCCTTCTCATACCTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGC 731588 Query 145890 AATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGA 145949 | || ||| || || || ||||||||||||||| ||||| | |||| | | Sbjct 731587 ACTCATCCAGACCAGGGCAGGCGTTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCCA 731528 Query 145950 CGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC--GCGCTTTGCA 146007 | | || ||| |||| ||| || | ||||| ||||| | | ||| | || || ||| Sbjct 731527 CTCTCTTCATGAACAGATCAGGGATCCACATGGCGTAGAAAAGGTCTCTGGCCCTCTGC- 731469 Query 146008 ATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTATAGATGTCCGCGTGCCACGG 146067 ||||| || |||| ||||| | || | | | ||| |||||| || Sbjct 731468 -TCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCAAAGTGCCAGGG 731410 Query 146068 TTCAATATAGACGGCGAGGGCTCC--TTTTCGT-TTGCCACCCTGGTCCACGTGACGTAC 146124 || | || | ||||| |||||| | || | ||||| |||||||| |||| ||| | Sbjct 731409 CTCTAGGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCCCCCCTGGTCGACGTAGCGTGC 731350 Query 146125 CATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGT---AGA 146181 | ||||||| | || | || |||||| ||| ||| ||| ||||| || ||| Sbjct 731349 CGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGTTGGAGTTTCCGTTGGTGCCAGA 731290 Query 146182 GTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGTA 146241 | || | | || || | | ||| || ||| |||| || || | | Sbjct 731289 G---ATGTAGCTCCCTGTAGATCTGATGCAGCTGACCGCCACACCGATGCCTCCAGCTGA 731233 Query 146242 CTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCG--CTT 146299 |||||| || ||| || | ||||| ||||||||||| |||||||| ||| ||| Sbjct 731232 CTTGGAGATGAGGGCACACTGCTTCAGCGTGTCGTAGATGCCTTCAATGCTGTCGTCCTT 731173 Query 146300 CGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAAC 146359 | ||| ||||||| ||||| | ||| ||| | | | ||||| || ||| | Sbjct 731172 C--ATGGCGAGCAGGAAGCAGCTGGACAGCTGAGGCCTGTTGGTCCCAGCGTTGAAGAGA 731115 Query 146360 GTCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCCGATACGTTTCGATAGCGTC 146418 |||||| ||||| || || || || || | || || || || || || || | Sbjct 731114 GTCGGGGAGGCGTGGGTGAACCACTTCTCTG-ACAGCAGGTTGTAGGTCTCAATCGCTGC 731056 Query 146419 TTGAATGT-CGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCT 146477 | || | |||| || || || | || ||| | |||||||||||| || || |||| Sbjct 731055 ATCGATATCCGTC-TTGTGGATTCCTACAGAGACTCTCATGAGCATGTGCTGCGGTCGCT 730997 Query 146478 CCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTGTATCCGAAAA 146537 | ||||||| || ||||| | || || |||||| || ||| | ||||| | Sbjct 730996 CGGCCACTTTGCCGTTGATCTTCAGCAGGTACGAACGCTCCAGAGTCTTGAAGCCGAAGA 730937 Query 146538 ATTTGTA 146544 | ||||| Sbjct 730936 AGTTGTA 730930 >seq56 Length=1093683 Score = 129 bits (142), Expect = 6e-25 Identities = 89/101 (88%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727 |||||| ||||||||| | ||||| |||||| |||||||||| |||||||||||||| | Sbjct 335792 TGTATTCTACGATCTCTGTGCACAGGTTGCTAGATTTGATGGTGCCCAGATTTTGCTGGT 335851 Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGT 145768 | || ||||||||||| ||||||||||| |||||||||||| Sbjct 335852 TGCTCTTCCTGTTGCAGGCGTCCTTGTACAGCATGTACGGT 335892 >SEQ16359 Length=2539 Score = 123 bits (136), Expect = 2e-23 Identities = 161/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 131016 CAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCG 131075 || ||||||||| | || | ||| |||||||| || |||||||| ||| | |||||| Sbjct 2535 CAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCG 2476 Query 131076 CGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTC 131135 || ||||||||||| || || |||| | ||| |||||||| |||||||| ||||| Sbjct 2475 ACCATCTTCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTC 2416 Query 131136 TTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGG 131194 |||||| ||| || ||| || | | ||| | || ||| ||| ||| | || | || Sbjct 2415 TTTGTCCTGGATCTT-TGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGG 2357 Query 131195 TAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | | |||||||| || || || || || || |||||||| Sbjct 2356 TGATTGTTTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 2317 >seq365 Length=500478 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | || |||||| || | || | ||| || ||||| || |||||||| || Sbjct 8931 GCCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGA 8990 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| ||||||||||| ||| |||| || | |||||| || || || Sbjct 8991 GAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCTGGGGG 9050 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||||||||| ||| || || | | ||| | || || ||| ||| | Sbjct 9051 AATGCCTTCTTTGTCCTGGATCTTAGCTTTCACGTTCTCGATGGTGTCACTGGGCTCAAC 9110 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||||||||| || || || || ||||| ||||||||| Sbjct 9111 CTCCAGGGTGATGGTTTTACCAGTGAGTGTCTTGACGAAGATCTGCATG 9159 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || ||||||||| | || | ||| || ||||| || |||||||| || Sbjct 3807 CCACCCCTCAGACGCAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 3866 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || ||||||||||| || |||| || | ||||||||| || || Sbjct 3867 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 3926 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | ||| | || || ||| ||| | Sbjct 3927 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 3986 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||| ||||| || || || || || || ||||||||| Sbjct 3987 TCCAGGGTGATGGTCTTACCAGTGAGTGTCTTGACAAAGATCTGCATG 4034 Score = 95.1 bits (104), Expect = 1e-14 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | || |||||| || | || | ||| || ||||| || |||||||| || Sbjct 9159 GCCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGA 9218 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||| || ||||||||||| || |||| || | ||||||||| || || Sbjct 9219 GAGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGG 9278 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTC 131183 || ||||||||||| ||| || ||||| | ||| | || ||| ||| ||| Sbjct 9279 AATGCCTTCTTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCGCTGGGCTC 9335 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 || || ||||||||||| ||| |||| || | ||||||||| || || || ||||||||| Sbjct 9658 TCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCTTTG 9717 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || |||||| ||||| | ||| | || || ||| ||| | || | ||| | | Sbjct 9718 TCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCTAGGGTGATG 9777 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || || || || || ||||| || || ||||||||| Sbjct 9778 GTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCATG 9813 >seq1673 Length=142529 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||||||||| | || | ||| |||||||| || |||||||| || | Sbjct 266 CCTCCACGGAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 207 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || |||||||| || || |||| | | ||||||||| |||||| Sbjct 206 AGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 147 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||||||||| ||| || ||| || | | ||| | || ||| ||| ||| | Sbjct 146 ATGCCTTCTTTGTCTTGGATCTT-TGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCAC 88 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||| | ||| || || || || || || || || ||||||||| || Sbjct 87 CTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATGCCT 36 >seq510 Length=807390 Score = 84.2 bits (92), Expect = 2e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 |||||||| || || |||| | ||| |||||||| |||||||| ||||||||||| | Sbjct 1575 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 1634 Query 131146 ATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTT 131204 || || ||| || | | ||| | || ||| ||| ||| | || | ||| | ||||| Sbjct 1635 ATCTT-TGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTT 1693 Query 131205 ACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||| || || || || || || |||||||| Sbjct 1694 ACCAGTCAGGGTCTTCACAAAGATCTGCAT 1723 Score = 84.2 bits (92), Expect = 2e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 |||||||| || || |||| | ||| |||||||| |||||||| ||||||||||| | Sbjct 4235 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 4294 Query 131146 ATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTT 131204 || || ||| || | | ||| | || ||| ||| ||| | || | ||| | ||||| Sbjct 4295 ATCTT-TGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTT 4353 Query 131205 ACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||| || || || || || || |||||||| Sbjct 4354 ACCAGTCAGGGTCTTCACAAAGATCTGCAT 4383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471833352533760