Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq49 531 6e-146 seq56 96.9 4e-15 >seq49 Length=1117640 Score = 531 bits (588), Expect = 6e-146 Identities = 1325/1995 (66%), Gaps = 29/1995 (1%) Strand=Plus/Minus Query 62098 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 62157 |||||||||||| | || || | | ||||| ||||| || ||||| | | ||| Sbjct 732504 CTGAATGGATCCGTTGTGAGCGATCAGCTGGTTCTTCATCTCCTCGTTCCACAGTCCTCT 732445 Query 62158 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 62217 ||| || | || | || ||||| || || || | ||||| ||||| |||| || || Sbjct 732444 CTCCGTCAGGTCTTTGAGCAGATGAGGGTTGACGATCTGAAACTCTCCCGACAGAACCCT 732385 Query 62218 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 62277 || ||||| || || ||||| || | ||| | ||||| || || |||| || || || Sbjct 732384 GCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGC 732325 Query 62278 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 62337 || || || || ||||| || |||| || | || || || | || | | | ||| Sbjct 732324 GGTGGAGGCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGAT 732265 Query 62338 TTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNN 62397 ||| || || || | | ||| | ||| ||||| | ||| | | Sbjct 732264 TTTCTCCTTCAGCAGCTTCCAGTCCCAGAGATCGGTCGG--CGTCTTCTCCCACATGTCG 732207 Query 62398 T--TGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTC 62455 | || || || || || ||| | || || | || || ||||| || || || Sbjct 732206 TACTGCAGGATGCCCTTGCTGACCGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAGCTCG 732147 Query 62456 TCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTA 62515 | || || || || |||||||| | || |||| ||||||||||||||||| | | Sbjct 732146 GCCGCCAGCTCGCAGCTCGCCTCCAGAGCGGCGTAGTAAATGGTTTCGAAGATGTGGATG 732087 Query 62516 TTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCT 62575 || || ||| || || |||| ||||| || | | | |||||| || ||||| ||| Sbjct 732086 TTGAGCAGTTGAGCCTCTGGGCTTTCAAACGGGTGACGCATGAGAATGAAGGCGTCGGCT 732027 Query 62576 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGA 62635 || || || || || || ||||| || || || | ||| || ||| | || ||||| || Sbjct 732026 AAACCCTGGACTCCGATTCCGATCGGCCTGTGGCGCTTGTTCGAGTTCTCGGCTTCCGGT 731967 Query 62636 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACA 62695 | || || || || || || ||||| || || || ||| |||| ||||||||| |||| Sbjct 731966 ACCGGGTAGTAGTTGATCTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTCACA 731907 Query 62696 TCCTTCAGTTTGAGAAAATCAAATCGCCCATCT---ATTACAAACATGTTCAATGCAACA 62752 | |||||| ||||||||| || ||| | || ||||||| | || | Sbjct 731906 TATGCCAGTTTCTTAAAATCAAAAGTCCGCTCTGGGGTGACGTACATGTTGAGGGCGATG 731847 Query 62753 GATGCCAGATTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGC 62810 || ||||| ||||| || |||||||| | | || | |||| | || || |||| Sbjct 731846 GAGGCCAGGTTACAGACCGCTACCTCGTCCTTGC--TGGTGTATTCAACAATTTCGGTGC 731789 Query 62811 AAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCAT 62870 | || || || ||||| ||||| || | ||| || || || ||||| |||| || || | Sbjct 731788 ACAGGTTGCTGCACTTTATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGT 731729 Query 62871 CCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 62930 | || || || ||| |||| || ||||| || |||| || || || || || | ||| | Sbjct 731728 CTTTGTACAGCATGTATGGCGTTCCAGTCTCTGTCTGCGACTCAATGATGGCGTACCACA 731669 Query 62931 -CGACTCGAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTTTCGTA--TAGTGTATAC 62986 | || ||||||| | | | | || | | | | || | || || | ||||| | Sbjct 731668 GCTGCT-GAGCCTTCACCACACGCTTGGCCTTGCCCTCCT-TCTCATACCTGGTGTAGAG 731611 Query 62987 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATC 63046 || || ||||| || ||||| | ||||| ||||| || | | ||||||||| Sbjct 731610 CTTC--TCAAACTCCTCCCCCCAGCACTCATCCAGACCAGGGCAGGCGTTGGGACACATC 731553 Query 63047 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 63105 | ||||| || || || ||||| ||||| || |||||||| ||||| | || Sbjct 731552 AGAGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAACAGATCAGGGATCCACATGGCG 731493 Query 63106 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63165 || ||| || ||||||| || || ||||| |||||||| ||||| || || || ||||| Sbjct 731492 TAGAAA-AGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAA 731434 Query 63166 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63225 | | | ||| | ||||| || || | ||| ||||| | |||| || | ||||| Sbjct 731433 GTCGAACACGTCAAAGTGCCAGGGCTCTAGGTACATGGCGAAGGCTCCGGGTCTCTTGTT 731374 Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285 || ||||| || | ||| | || ||||| || |||||||||| ||| || | | || Sbjct 731373 GCCCCCCTGGTCGACGTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCC 731314 Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63345 ||||| | || ||||| || ||||| ||||| || | | | || || | | Sbjct 731313 GTTGGAGTTTCCGTTGGTGCCAGAGATGTAGCTCCCTGTAGATCTGATGCAGCTGACCGC 731254 Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405 | ||| || || || || || ||||| | || || | || | ||| || ||||| Sbjct 731253 CACACCGATGCCTCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCGTAGAT 731194 Query 63406 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63465 ||| || || || || ||| ||||| || || || ||||| |||| || | | | Sbjct 731193 GCCTTCAATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGAGGCCTGTT 731134 Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525 || || || || || | || || || ||||| || ||||| || || || || || || Sbjct 731133 GGTCCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAACCACTTCTCTGACAGCAGGTT 731074 Query 63526 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63585 ||| |||||||| |||| || |||||| | || |||||||| | ||| | ||| | Sbjct 731073 GTAGGTCTCAATCGCTGCATCGATATCCGTCTTGTGGATTCCTACAGAGACTCTCATGAG 731014 Query 63586 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63645 ||||||||| |||| || | | ||| ||| || |||| || ||| || |||| Sbjct 731013 CATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTACGAACGCTCCAG 730954 Query 63646 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705 ||| || || || || ||||||| || || ||||| ||||| || || ||||||||| Sbjct 730953 AGTCTTGAAGCCGAAGAAGTTGTAGGAGAAATCTCGGTCGTAGATTATGGACGAGTTGAG 730894 Query 63706 TTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATAGGAAAATGTT 63764 | || || | || ||| | || | || | ||| || || ||||| | || Sbjct 730893 TCGGTCTTTGTTTTCTAGAACGATGTCAAGCGT-CTCCTTGGAGATCATAGGTGA--GTG 730837 Query 63765 TCCCATTTTTA--GGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 63822 | | || | || |||| |||||| | | ||||||||||| || || || | ||| Sbjct 730836 GCGTTTGTTCAGGGGGTTGATGTAGTTGTACAGGTCCTCCATCACGTCGCTGAACACTTT 730777 Query 63823 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGG 63882 || || |||||||| || || || ||||| || | ||| || || ||||| || || || Sbjct 730776 CTTAGTCTCTTTGTGCAGGTTGGAGACGGCGATCCGAGCAGCGAGGATGGCGTAGTCGGG 730717 Query 63883 ATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGT 63942 |||| || || ||||| || || || |||||||| ||||| | || || || || Sbjct 730716 GTGTTTAGTTGTGAGCGTGGCAGCGATCTCTGCTGCCAGCGTGTCGAGCTCCACAGTGGT 730657 Query 63943 TACACCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATC 64002 || || | || | || ||||| |||||||| | || | || || | | || Sbjct 730656 GACTCCGCTGTACAGACCCTGGATCACCTTCATGGTGATCTGGGCCGGGTCCACAAAGTC 730597 Query 64003 AGTGTTTAAGCCATAACATAATTTTCT-AATACGAGATGTGATTTTATCAAACATGACAT 64061 || ||| | || || || || |||| || ||||| |||||||| || |||||||| Sbjct 730596 AGAGTTCAGCCCGTAGCA-AAGCTTCTGGATGCGAGAGGTGATTTTGTCGAACATGACGC 730538 Query 64062 TTTCCTTGTATCCAT 64076 ||||| | ||||| Sbjct 730537 GTTCCTGGCGTCCAT 730523 >seq56 Length=1093683 Score = 96.9 bits (106), Expect = 4e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 |||| || | ||| || ||||||||||| || || || || || || | || || || | Sbjct 338076 CACTGAACACTTTCTTGGTTTCTTTGTGCAGGTTAGAAACTGCGATCCGTGCAGCCAGGA 338135 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 | ||||| || ||||||| || || ||||| ||| | || |||||||||||||||| Sbjct 338136 TTGCATAGTCAGGATGTTTAGTGGTGAGGGTGGCCGCTGTCTCTGCTGCCAGAGTGTCCA 338195 Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 || || || || || ||| | || | || ||||| |||||||| Sbjct 338196 GCTCCACAGTGGTGACTCCACTGTACAGACCCTGGATCACCTTCAT 338241 Score = 93.3 bits (102), Expect = 5e-14 Identities = 124/170 (73%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976 |||| || || || ||||| || || |||||| ||| | || || || |||||||||| Sbjct 334328 TCCAACCATAGAAGTGCATGCTGGTCAGTTTGCCATAGTTTGGCTCAGCAATATGGATAT 334387 Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036 | | ||| || || || || ||| |||| || | ||||| ||||| || | || |||| Sbjct 334388 TTAGAGACTGGCTCTGGTCAATGTAGGCACCGCGATCTGCCGCCATCTTGAGAACTGTCT 334447 Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 62085 | || | |||||||| | |||||||| |||| |||| | ||| || || Sbjct 334448 TCTGGGAGATTTCCCAGACTGTTTTATACAACT-GCTTCAGATCATCGGG 334496 Score = 84.2 bits (92), Expect = 3e-11 Identities = 125/177 (71%), Gaps = 3/177 (2%) Strand=Plus/Plus Query 62455 CTCAGCT---AGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTT 62511 ||||||| ||||||||||| ||||| | || |||| || ||||| || ||||||| Sbjct 335248 CTCAGCTGCCAGTTCACAACTGGCCTCCAGAGCGGCGTAGTAGATGGTCTCAAAGATCTG 335307 Query 62512 CTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTC 62571 | || || || || || |||| |||||||||||| | || || || || || Sbjct 335308 AATGTTGAGTAACTGGGCCTCTGGGCTTTCAAATGGATAACGCATAAGGATGAAGGCATC 335367 Query 62572 TGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGC 62628 || | ||| || ||||| || || || || || || | ||| ||||| ||||||| Sbjct 335368 AGCCAGTCCCTGCACACCGATTCCAATTGGCCTGTGACGCTTGTTAGAATTTTCAGC 335424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633391108954400