Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1673 178 2e-39 SEQ16359 172 1e-37 seq365 163 5e-35 seq510 111 3e-19 SEQ20558 84.2 4e-11 SEQ20323 84.2 4e-11 seq670 84.2 4e-11 seq277 84.2 4e-11 >seq1673 Length=142529 Score = 178 bits (196), Expect = 2e-39 Identities = 182/235 (77%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 ||| |||||||| || || |||| |||| ||| || |||||||| || |||||||| || Sbjct 273 TTAGTTTCCTCCACGGAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTA 214 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 || || || || | |||||||| | |||||| || || || || || || || ||||| Sbjct 213 GTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTC 154 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 || || |||||||| |||||||| |||||||| || || ||| |||||||| |||| Sbjct 153 AGGAGGGATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTCTCAATGGTGTC-GCTGG 95 Query 68408 T-TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||| ||||||||| || || ||||||||||| || || |||||||| Sbjct 94 GCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 40 >SEQ16359 Length=2539 Score = 172 bits (190), Expect = 1e-37 Identities = 171/219 (78%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| |||| ||| || |||||||| || |||||||| || |||||||| || | Sbjct 2534 AGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGA 2475 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||||| |||||| || || || || || | ||| ||||| || || |||||||| Sbjct 2474 CCATCTTCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCT 2415 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422 ||||| || |||||||| || || |||||||||||| ||| | || || |||| ||| Sbjct 2414 TTGTCCTGGATCTTTGCTTTCACATTCTCGATGGTGTC-GCTGGGCTCCACCTCCAGGGT 2356 Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| ||||| || || |||||||| || || |||||||| Sbjct 2355 GATTGTTTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 2317 >seq365 Length=500478 Score = 163 bits (180), Expect = 5e-35 Identities = 158/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || ||||| |||||||||||||| || || ||||| || | |||||||| | |||| Sbjct 4118 TGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGC 4177 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || ||||| || | || || ||||| || ||||||||||||||||| || ||||| Sbjct 4178 TTTCCAGCGAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTG 4237 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 || || || ||| |||||||| | || || || | |||||||||||| || ||| Sbjct 4238 GCTTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTG 4297 Query 68439 AGGGTCTTGACGAATATCTGCAT 68461 || ||||||||||| |||||||| Sbjct 4298 AGTGTCTTGACGAAGATCTGCAT 4320 Score = 159 bits (176), Expect = 6e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| || | ||| || ||||| || || |||||||| || || ||||| || | Sbjct 3816 AGACGCAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 3875 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || || || || | || || ||||| || |||||||| ||| Sbjct 3876 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCCTCC 3935 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || ||||| |||||||| |||||||||||| | || || |||| |||| Sbjct 3936 TTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 3995 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || ||||| |||||||| || |||||||| Sbjct 3996 ATGGTCTTACCAGTGAGTGTCTTGACAAAGATCTGCAT 4033 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| || | ||| || ||||| || || |||||||| || || ||||| || | Sbjct 8941 AGACGCAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 9000 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 || || || | |||||| || ||||| || | || || || || || ||||||||||| Sbjct 9001 CCGTCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCT 9060 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || ||||| || || ||| |||||||||||| | || || |||| |||| Sbjct 9061 TTGTCCTGGATCTTAGCTTTCACGTTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTG 9120 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| || ||||| ||||||||||| |||||||| Sbjct 9121 ATGGTTTTACCAGTGAGTGTCTTGACGAAGATCTGCAT 9158 Score = 123 bits (136), Expect = 5e-23 Identities = 140/185 (76%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| || | ||| || ||||| || || |||||||| || || ||||| || | Sbjct 9169 AGACGCAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 9228 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 || ||||| | |||||| || || || || | || || ||||| || ||||||||||| Sbjct 9229 CCGTCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCT 9288 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422 ||||| || ||||| |||||||| |||||||||||| ||| | || || |||| ||| Sbjct 9289 TTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTC-GCTGGGCTCAACCTCCAGGGT 9347 Query 68423 GATGG 68427 ||||| Sbjct 9348 GATGG 9352 Score = 111 bits (122), Expect = 3e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 68326 CGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGA 68385 |||| || | || || ||||| || |||||||| |||||||| || || |||||||||| Sbjct 8795 CGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATTTTTGCCTTGA 8854 Query 68386 CGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCT 68445 | ||| |||||||| | || || |||| |||||||| || || |||||||||| Sbjct 8855 CATTCTCAATGGTGTCACTGGGCTCAACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCT 8914 Query 68446 TGACGAATATCTGCAT 68461 ||||||| |||||||| Sbjct 8915 TGACGAAGATCTGCAT 8930 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || ||||| || | || || ||||| || ||||||||||| Sbjct 9655 CCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCT 9714 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || || || |||||||| ||| |||||||| | || || || | |||| Sbjct 9715 TTGTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCTAGGGTG 9774 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || ||||| || || || |||||||| Sbjct 9775 ATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 9812 >seq510 Length=807390 Score = 111 bits (122), Expect = 3e-19 Identities = 115/148 (78%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 68315 CTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAAT 68374 |||||| || || || || || | ||| ||||| || || |||||||| ||||| || || Sbjct 1577 CTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGGAT 1636 Query 68375 CTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||||| || || |||||||||||| ||| | || || |||| |||||| ||||| | Sbjct 1637 CTTTGCTTTCACATTCTCGATGGTGTC-GCTGGGCTCCACCTCCAGGGTGATTGTTTTAC 1695 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || |||||||| || || |||||||| Sbjct 1696 CAGTCAGGGTCTTCACAAAGATCTGCAT 1723 Score = 111 bits (122), Expect = 3e-19 Identities = 115/148 (78%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 68315 CTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAAT 68374 |||||| || || || || || | ||| ||||| || || |||||||| ||||| || || Sbjct 4237 CTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGGAT 4296 Query 68375 CTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||||| || || |||||||||||| ||| | || || |||| |||||| ||||| | Sbjct 4297 CTTTGCTTTCACATTCTCGATGGTGTC-GCTGGGCTCCACCTCCAGGGTGATTGTTTTAC 4355 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || |||||||| || || |||||||| Sbjct 4356 CAGTCAGGGTCTTCACAAAGATCTGCAT 4383 >SEQ20558 Length=1072 Score = 84.2 bits (92), Expect = 4e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||||||| | |||||||||| ||||| ||| |||||||||| ||| ||||| Sbjct 235 CATGACGCCCATCCTCTGGTACTCGCCCACCCGCTTCTCAAAGAAGTTGGTCTTTCCCTC 294 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030 || || ||| |||||||||||| |||||||| || Sbjct 295 CAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTGTC 330 >SEQ20323 Length=1115 Score = 84.2 bits (92), Expect = 4e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||||||| | |||||||||| ||||| ||| |||||||||| ||| ||||| Sbjct 278 CATGACGCCCATCCTCTGGTACTCGCCCACCCGCTTCTCAAAGAAGTTGGTCTTTCCCTC 337 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030 || || ||| |||||||||||| |||||||| || Sbjct 338 CAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTGTC 373 >seq670 Length=351828 Score = 84.2 bits (92), Expect = 4e-11 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTACTTC 68416 |||||||| || || |||||||||||||| ||||| ||||| |||| || || || Sbjct 241926 CCTTCCTTATCCTGGATCTTTGCCTTGACATTTTCGATAGTGTC-GCTGGGCTCAACCTC 241868 Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||||||||| ||||| | ||||| ||||| |||||||| Sbjct 241867 AAGGGTGATGGTTTTCCCCGTCAACGTCTTCACGAAGATCTGCAT 241823 >seq277 Length=566994 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 10740 ACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGG 10799 |||||||| | |||||||||| ||| ||||||||||||||||||| | |||||| || Sbjct 256617 ACCTCCTCTGCCGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATCTGCCAGATGTCGTGG 256558 Query 10800 TACCGGATGGGGAA 10813 ||| |||||||||| Sbjct 256557 TACTGGATGGGGAA 256544 Score = 84.2 bits (92), Expect = 4e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||||||| | |||||||||| ||||| ||| |||||||||| ||| ||||| Sbjct 270373 CATGACGCCCATCCTCTGGTACTCGCCCACCCGCTTCTCAAAGAAGTTGGTCTTTCCCTC 270432 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030 || || ||| |||||||||||| |||||||| || Sbjct 270433 CAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTGTC 270468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921272022204080