Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value SEQ16359 122 7e-23 seq1673 114 1e-20 seq510 102 7e-17 seq365 100 2e-16 >SEQ16359 Length=2539 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| | || ||| |||||| || || |||||| Sbjct 2513 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTCTAGCTGCTTACCA 2454 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| ||||| || ||||| ||||| |||||||||||||| |||||| ||| Sbjct 2453 GCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGGATCTTTGCTTTC 2394 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||||| ||| || || |||| ||| | ||||| || ||||| || Sbjct 2393 ACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTACCAGTCAGGGTC 2334 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 2333 TTCACAAAGATCTGCAT 2317 >seq1673 Length=142529 Score = 114 bits (126), Expect = 1e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| || || || || |||||| || || |||||| Sbjct 236 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTACCA 177 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| ||||| |||||||||||||| |||||| ||| Sbjct 176 GCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTGTCTTGGATCTTTGCTTTC 117 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||||| ||| || || |||| ||| | || ||||| || || || Sbjct 116 ACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTC 57 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || ||||| ||||||||| || Sbjct 56 TTCACAAAGATCTGCATGCCT 36 >seq510 Length=807390 Score = 102 bits (112), Expect = 7e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || |||||||| |||| ||||| || ||||| ||||| |||||||||||||| Sbjct 1575 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 1634 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 |||||| ||| | | || | ||||||| ||| || || |||| ||| | ||||| Sbjct 1635 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 1694 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || ||||| || || ||||| |||||||| Sbjct 1695 CCAGTCAGGGTCTTCACAAAGATCTGCAT 1723 Score = 102 bits (112), Expect = 7e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || |||||||| |||| ||||| || ||||| ||||| |||||||||||||| Sbjct 4235 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 4294 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 |||||| ||| | | || | ||||||| ||| || || |||| ||| | ||||| Sbjct 4295 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 4354 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || ||||| || || ||||| |||||||| Sbjct 4355 CCAGTCAGGGTCTTCACAAAGATCTGCAT 4383 >seq365 Length=500478 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||||||||| |||||||| || | || || |||||| || || || ||| Sbjct 4124 GTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTTCCA 4183 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | | ||| ||||| |||||||||||||| ||||| ||||| ||| Sbjct 4184 GCGAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTC 4243 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| || || || | ||| | ||||| || || || || Sbjct 4244 ACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTGAGTGTC 4303 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 4304 TTGACGAAGATCTGCATG 4321 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 |||||| || || || |||||| |||| | | ||| ||||| || |||||||||||||| Sbjct 9657 ATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCTTT 9716 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| || || || | | |||| |||||| ||| || || || | ||| | Sbjct 9717 GTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCTAGGGTGAT 9776 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || ||||| || || ||||| ||||| ||||||||| Sbjct 9777 GGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCATG 9813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419978668519368