Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value SEQ16359 132 1e-25 seq365 131 4e-25 seq510 96.9 8e-15 seq670 84.2 5e-11 >SEQ16359 Length=2539 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| || ||||||| || || || || ||| Sbjct 2507 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTCTAGCTGCTTACCAGCAAAG 2448 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||||||| || || | ||||| |||||||| |||||||| || |||||||| || Sbjct 2447 ATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGGATCTTTGCTTTCACATTC 2388 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| | || || || || ||||| || || || ||||| ||||| || Sbjct 2387 TCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTACCAGTCAGGGTCTTCACA 2328 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 2327 AAGATCTGCAT 2317 >seq365 Length=500478 Score = 131 bits (144), Expect = 4e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || ||||| | ||| ||||| || ||||| | || ||||| ||||| Sbjct 4129 TTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCGAA 4188 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||| || | || || ||||| || |||||||| || |||||||| || Sbjct 4189 GATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATT 4248 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || || | || || ||||| ||||| || || || || || |||||||| Sbjct 4249 CTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTGAGTGTCTTGAC 4308 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 4309 GAAGATCTGCAT 4320 Score = 129 bits (142), Expect = 1e-24 Identities = 171/235 (73%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | || | || || || || | ||| ||| || ||||| || |||| Sbjct 8928 CATG-CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGT 8986 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | ||| ||||| ||||| || | || || || |||||||||| | ||| ||| | Sbjct 8987 CAGAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGA---T 9043 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| || |||||||| |||||||| || ||||||||||| || || | || || | Sbjct 9044 CTGGGGGAATGCCTTCTTTGTCCTGGATCTTAGCTTTCACGTTCTCGATGGTGTCACTGG 9103 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || || || || || ||||||||||| |||||||| Sbjct 9104 GCTCAACCTCCAGGGTGATGGTTTTACCAGTGAGTGTCTTGACGAAGATCTGCAT 9158 Score = 86.0 bits (94), Expect = 1e-11 Identities = 120/167 (72%), Gaps = 6/167 (4%) Strand=Plus/Plus Query 288310 GTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG--- 288366 ||||| || ||||| | || || || |||||||||| | ||| || |||||| Sbjct 9649 GTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGG---TCTGGGGGA 9705 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| ||||||||||| || || || || || || | || || | || || Sbjct 9706 ATGCCTTCTTTGTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACC 9765 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || || || || || || |||||||| Sbjct 9766 TCTAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 9812 >seq510 Length=807390 Score = 96.9 bits (106), Expect = 8e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATT 288387 || || || || ||||||||||| || || | ||||| |||||||| |||||||| Sbjct 1578 TGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGGATC 1637 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 || |||||||| || || || | ||||| | || || || || ||||| || || || Sbjct 1638 TTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTACCA 1697 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| || || |||||||| Sbjct 1698 GTCAGGGTCTTCACAAAGATCTGCAT 1723 Score = 96.9 bits (106), Expect = 8e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATT 288387 || || || || ||||||||||| || || | ||||| |||||||| |||||||| Sbjct 4238 TGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGGATC 4297 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 || |||||||| || || || | ||||| | || || || || ||||| || || || Sbjct 4298 TTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTACCA 4357 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| || || |||||||| Sbjct 4358 GTCAGGGTCTTCACAAAGATCTGCAT 4383 >seq670 Length=351828 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| ||||||||||| || || || || ||||| |||| ||||| | || || || Sbjct 241926 CCTTCCTTATCCTGGATCTTTGCCTTGACATTTTCGATAGTGTCGCTGGGCTCAACCTCA 241867 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || ||||| |||| ||||| ||||| |||||||| Sbjct 241866 AGGGTGATGGTTTTCCCCGTCAACGTCTTCACGAAGATCTGCAT 241823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179194713010692