Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq49 158 1e-33 seq277 96.9 4e-15 >seq49 Length=1117640 Score = 158 bits (174), Expect = 1e-33 Identities = 521/795 (66%), Gaps = 15/795 (2%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | || | | |||| ||||| |||| ||| |||||||||||| Sbjct 732377 TAGATGTTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 732318 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 ||||||||||| || |||| || |||||||| | | || | || || ||| Sbjct 732317 GCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATTTTCTCC 732258 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTT-GTCTCCCCCTGCCACATATCAAACTGGAG 114120 || || | |||||| || || | | | | | || |||||| || |||| || Sbjct 732257 TTCAGCAGCTTCCAGTCCCAGA-GATCGGTCGGCGTCTTCTCCCACATGTCGTACTGCAG 732199 Query 114121 GATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAA 114180 ||| || | | | | || || ||||| | |||||||| ||||| | |||||| Sbjct 732198 GATGCCCTTGCTGACCGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAGCTCGGCCGCCAG 732139 Query 114181 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 114240 ||| |||||||||| || || |||| || || || || || ||| | || | || Sbjct 732138 CTCGCAGCTCGCCTCCAGAGCGGCGTAGTAAATGGTTTCGAAGATGTGGATGTTGA--GC 732081 Query 114241 C-TTG-GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCT 114298 ||| ||||| | ||||||| | | || | ||| || | || || | ||| Sbjct 732080 AGTTGAGCCTCTGGGCTTTCAAACGGGTGACGCATGAGAATGAAGGCGTCGGCTAAACCC 732021 Query 114299 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT-TCGAGCGGTCTCCACGGG 114357 ||||| |||| || || || | || | | | || || || ||| || | || || Sbjct 732020 TGGACTCCGATTCCGATCGGCCTGTGGCGCTTGTTCGAGTTCTCG-GCTTCCGGTACCGG 731962 Query 114358 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 114417 || | || | ||||||| | | || || |||||| || || || || | | ||| Sbjct 731961 GTAGTAGTTGATCTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTCACAT-ATG 731903 Query 114418 A-AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTG 114476 || || | |||||||| | || |||| |||| ||| | |||||||| | Sbjct 731902 CCAGTTTCTTAAAATCAAAAGTCCG---CTCTGGGGTGACGTACATGTTGAGGGCGATGG 731846 Query 114477 ACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACA 114536 | ||||| ||||| || | ||| ||||| ||||| || | |||||| || |||| Sbjct 731845 AGGCCAGGTTACAGACCGCTACCTCGTCCTTGCTGGTGTATTCAACAATTTCGGTGCACA 731786 Query 114537 AATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCT 114596 || | ||| |||||||||| |||| || || ||| |||| || || || | Sbjct 731785 GGTTGCTGCACTTTATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTT 731726 Query 114597 TGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CA 114655 |||| |||||||||||||| || ||||| || || |||| | || || | ||| | | Sbjct 731725 TGTACAGCATGTATGGCGTTCCAGTCTCTGTCTGCGACTCAATGATGGCGTACCACAGCT 731666 Query 114656 TCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCT 114715 | | | || || || ||||| ||||||| ||| ||| | |||||||| Sbjct 731665 GCTGAGCCTTCACCACACGC-TTGGCCTTGCCCTCCTTCTCATACCTGGTGTAGAGCTTC 731607 Query 114716 TCAAACTCTTCACCC 114730 |||||||| || ||| Sbjct 731606 TCAAACTCCTCCCCC 731592 Score = 82.4 bits (90), Expect = 9e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 115066 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 115125 || ||| || || || || |||| ||||| | || |||| | | || || ||||||| Sbjct 731253 CACACCGATGCCTCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCGTAGAT 731194 Query 115126 CCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGG 115185 || || || ||| |||| | |||| ||||||||||| |||| || ||||| Sbjct 731193 GCCTTCAATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGAGGCCTGTT 731134 Query 115186 TGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 115225 || |||||||||||||| || || | |||||| ||||| Sbjct 731133 GGTCCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAAC 731094 >seq277 Length=566994 Score = 96.9 bits (106), Expect = 4e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 ||||||| | | |||||| || || |||||| ||| || ||||| || || | ||||| Sbjct 257392 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 257333 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185 ||| |||||| || ||| || ||||| |||||||||||||||||||| ||||| | Sbjct 257332 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGG 257273 Query 126186 CAAAGAGACGCTC 126198 | | | |||||| Sbjct 257272 CCACAACACGCTC 257260 Score = 96.9 bits (106), Expect = 4e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 ||||||| | | |||||| || || |||||| ||| || ||||| || || | ||||| Sbjct 272204 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 272263 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185 ||| |||||| || ||| || ||||| |||||||||||||||||||| ||||| | Sbjct 272264 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGG 272323 Query 126186 CAAAGAGACGCTC 126198 | | | |||||| Sbjct 272324 CCACAACACGCTC 272336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597126501095120