Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq49 266 3e-66 seq56 93.3 4e-14 >seq49 Length=1117640 Score = 266 bits (294), Expect = 3e-66 Identities = 1033/1606 (64%), Gaps = 47/1606 (3%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | | ||| | |||||| ||||||||| |||||||| || ||||| | |||| Sbjct 730930 TACAACTTCTTCGGCTTCAAGACTCTGGAGCGTTCGTACCTGCTGAAGATCAACGGCAAA 730989 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || ||||||||||||| || |||| ||| | ||| | | || || ||| | ||| Sbjct 730990 GTGGCCGAGCGACCGCAGCACATGCTCATGAGAGTCTCTGTAGGAATCCAC----AAGAC 731045 Query 93838 --ATGCCGAATGTTTTGCGGGCTTTCAGAG-----ACATGCGG---GACAAGAGGTATAC 93887 || ||| ||| | || ||| || ||| | || ||| ||| || Sbjct 731046 GGATATCGA------TGCAGCGATTGAGACCTACAACCTGCTGTCAGAGAAGTGGTTCAC 731099 Query 93888 CATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTT 93947 | ||| ||||||| || |||||||| |||||| ||| ||| |||| || || Sbjct 731100 CCACGCCTCCCCGACTCTCTTCAACGCTGGGACCAACAGGCCTCAGCTGTCCAGCTGCTT 731159 Query 93948 CCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGC 94007 |||| | | | |||| |||| ||| || || | ||||| || ||| | ||||| Sbjct 731160 CCTGCTCGCCATGAAGGACGACAGCATTGAAGGCATCTACGACACGCTGAAGCAGTGTGC 731219 Query 94008 GACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGG 94067 |||||| || | || || || ||||| | ||| | | | | | | || Sbjct 731220 CCTCATCTCCAAGTCAGCTGGAGGCATCGGTGTGGCGGTCAGCTGCATCAGATCTACAGG 731279 Query 94068 TTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTT 94127 ||||||| || ||||| || | ||||||||| |||||||| ||||| | || | Sbjct 731280 GAGCTACATCTCTGGCACCAACGGAAACTCCAACGGGCTCGTCCCCATGCTGAGAGTTTA 731339 Query 94128 CAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGT 94187 ||||||| |||| |||||||| |||||||| || | ||| || | ||||| | Sbjct 731340 CAACAACACGGCACGCTACGTCGACCAGGGGGGCAACAAGAGACCCGGAGCCTTCGCCAT 731399 Query 94188 CTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGG 94247 || || |||||||||||| |||||| | ||| | || ||| |||||| || Sbjct 731400 GTACCTAGAGCCCTGGCACTTTGACGTGTTCGACTTCCTGGAGCTGAAGAAGAACACAGG 731459 Query 94248 CAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTAT 94307 || || | |||||||||||||||| |||||||| | ||| | || || || || || Sbjct 731460 AAAGGAGGAGCAGAGGGCCAGAGACCTTTTCTACGCCATGTGGATCCCTGATCTGTTCAT 731519 Query 94308 GAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACT 94367 ||| | || |||| ||| | |||| ||| | |||||||| | || || || || Sbjct 731520 GAAGAGAGTGGAGAGCAACCAGGACTGGTCTCTGATGTGTCCCAACGCCTGCCCTGGTCT 731579 Query 94368 GTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAA 94427 | || || || | ||||| | | || | | || || | ||||||| Sbjct 731580 GGATGAGTGCTGGGGGGAGGAGTTTGAGAAGCTCTACACCAGGTATGAGAAGGAGGGCAA 731639 Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 ||||| | || || | ||| | |||||||| | ||| | || ||| || Sbjct 731640 GGCCAAGCGTGTGGTGAAGGCTCAGCAGCTGTGGTACGCCATCATTGAGTCGCAGACAGA 731699 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 ||| || ||||| ||||| ||| ||| ||| | |||| ||| |||||||||| | Sbjct 731700 GACTGGAACGCCATACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAA 731759 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 || || || ||| || || ||||||||||| ||||| || || || ||| Sbjct 731760 TCTGGGCACCATAAAGTGCAGCAACCTGTGCACCGAAATTGTTGAATACACCAGCAAGGA 731819 Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTA 94667 |||| | || || |||||||||| ||||||| || || || | || || | || | Sbjct 731820 CGAGGTAGCGGTCTGTAACCTGGCCTCCATCGCCC--TCAACAT--GTACGTCA-CCCCA 731874 Query 94668 CACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT 94727 | | ||| || ||| | || | || | | | | | || ||| Sbjct 731875 GA-GCGGACT------TTTGATTTTAAGAAACTGGCATATGTGACCAAAGTAATCGTCAA 731927 Query 94728 GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAA 94787 |||||||||| | | ||||| | |||| |||||| || ||||| || |||||||| || Sbjct 731928 AAACCTGAACAAGATTATCGAGATCAACTACTACCCGGTACCGGAAGCCGAGAACTCGAA 731987 Query 94788 CCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGAT 94847 | | || |||| ||||| ||||| ||||||||||| || ||||| | | | || Sbjct 731988 CAAGCGCCACAGGCCGATCGGAATCGGAGTCCAGGGTTTAGCCGACGCCTTCATTCTCAT 732047 Query 94848 GCGTCTGCCCTACGA---CTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAG 94904 ||||| || | || | | | | | | | | | || | |||| ||||||| Sbjct 732048 GCGTCACCCGTTTGAAAGCCCAG-AGGCTCAACTG--CTCAACATCCACATCTTCGAAAC 732104 Query 94905 CATTTATTACGGGGC-CATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC 94963 |||||| |||| || | || | | | | | | |||| | || ||| || Sbjct 732105 CATTTACTACGCCGCTCTGGAGGCGAGCTG-CGAGCTGGC---GGCCGAGCTCGGCCCCT 732160 Query 94964 ACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023 |||| ||| | || || || | ||||||| | |||| |||| | |||| Sbjct 732161 ACGAGACGTACGAGGGCTCCCCGGTCAGCAAGGGCATCCTGCAGTACGACATGTGGGAGA 732220 Query 95024 TGAAGCCCTCGGGTCTGTACGACTGGGAAGCT-CTACGCGCTGATGTTATCAAACACGGT 95082 || ||| | | ||| | |||| ||||||| || | | | |||||| || Sbjct 732221 AGACGCCGACCGATCTCTGGGACT-GGAAGCTGCTGAAGGAGAAAATCGCCAAACATGGC 732279 Query 95083 GTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGC 95142 |||| ||| ||||| ||||||| |||||||| |||||||| || |||||||| ||| Sbjct 732280 GTGAGGAACAGCCTGCTGCTGGCCCCGATGCCCACAGCCTCCACCGCCCAGATCCTGGGC 732339 Query 95143 AACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGG 95202 ||||||||||| ||||| ||| |||| |||| | |||| | | |||| || | || Sbjct 732340 AACAACGAGTCCATCGAAGCCTACACCAGCAACATCTACACCCGCAGGGTTCTGTCGGGA 732399 Query 95203 GAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGT 95262 || || | || ||||| || || || ||||||||| || ||||| Sbjct 732400 GAGTTTCAGATCGTCAACCCTCATCTGCTCAAAGACCTGACGGAGAGAGGACTGTGGAAC 732459 Query 95263 GACAAGGTCAAGAACCAACTGCTACGCGC-CAACGGCTCCGTCCAG 95307 || || | |||||||| ||| | ||| | |||||| ||| | ||| Sbjct 732460 GAGGAGATGAAGAACCAGCTGAT-CGCTCACAACGGATCCATTCAG 732504 Score = 109 bits (120), Expect = 5e-19 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 93331 GTCATGTTCGACAAGATCACTACCAGGGTGCGCAAACTTTGCGAGGGTCTGGACTCTGAC 93390 |||||||||||||| ||||| | | | | || |||||| | || ||| |||||||| Sbjct 730540 GTCATGTTCGACAAAATCACCTCTCGCATCCAGAAGCTTTGCTACGGGCTGAACTCTGAC 730599 Query 93391 TTCGTGGATCCCGTCGAGGTCACCATGAGAGTGAATCAGGGAATATATGCCGGGGTCACA 93450 || ||||| || | | || ||||||||| |||| ||||| | || ||| ||||| Sbjct 730600 TTTGTGGACCCGGCCCAGATCACCATGAAGGTGATCCAGGGTCTGTACAGCGGAGTCACC 730659 Query 93451 ACTGTCGAGCTCGATCTTCTGGCCGCGGAGACTTGTGCCTTCATGAGTACGAATCACCCG 93510 ||||| |||||||| ||||| || |||| |||| | | || || ||||| Sbjct 730660 ACTGTGGAGCTCGACACGCTGGCAGCAGAGATCGCTGCCACGCTCACAACTAAACACCCC 730719 Query 93511 GACTACTCCATTTTGGCTGCTCGAATCTGCCTGAGCAACCTCTATAAAGAAAC 93563 |||||| |||| | |||||||| ||| | | |||||| | ||||| || Sbjct 730720 GACTACGCCATCCTCGCTGCTCGGATCGCCGTCTCCAACCTGCACAAAGAGAC 730772 >seq56 Length=1093683 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 |||||||||| ||| |||||| |||||||||||||||| || || || || |||||| Sbjct 334930 CACGGTGTGAGGAACAGTCTGCTTTTGGCCCCCATGCCCACAGCTTCTACTGCTCAGATC 334871 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGC-GGGTGCT 95195 || |||||||| ||||| | || | | |||| |||| | ||| ||| || ||||||| Sbjct 334870 CTGGGCAACAATGAGTCCATTGAGGCTTACACCAGCAACATCTAC-ACACGCAGGGTGCT 334812 Query 95196 CGCCGGGGAATTCCCCGTCATCA 95218 | | || || || | |||| || Sbjct 334811 CTCAGGAGAGTTTCAGGTCAGCA 334789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494535118607440