Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq49 210 2e-49 SEQ16359 123 2e-23 seq1673 105 7e-18 seq510 102 8e-17 seq56 89.7 5e-13 >seq49 Length=1117640 Score = 210 bits (232), Expect = 2e-49 Identities = 970/1514 (64%), Gaps = 50/1514 (3%) Strand=Plus/Minus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| | |||||||| |||| || || | | || | ||||| ||| | | Sbjct 732418 GGTTGACGATCTGAAACTCTCCCGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGG 732359 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 ||| | ||| ||||| ||||| || || || || |||| || || ||||| |||| Sbjct 732358 CTTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCA 732299 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCT-CGAATGTCGTCCTTCAACGCCTGCCAATCC 153206 || || |||| || ||| || ||| | || ||||||| | || ||| ||| Sbjct 732298 GCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATTTTC-TCCTTCAGCAGCTTCCAGTCC 732240 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266 || || | | ||| ||| | ||||||||||||||| | | || ||| | || Sbjct 732239 CAGAGATCGGTCGGCGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACCGGG 732180 Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGG--GCCAGTTCGCAGCTAGCCTCGA 153324 ||| | |||| |||| |||| || | || ||||| |||||||| ||||| | Sbjct 732179 GAGCCCTCGTACGTCTCGTAGGGGCCGA-GC-TCGGCCGCCAGCTCGCAGCTCGCCTCCA 732122 Query 153325 GCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCT 153384 | ||| | ||||| ||||||||| ||| || | ||||| | || ||| ||| | Sbjct 732121 GAGCGGCGTAGTAAATGGTTTCGAAGATGTGGATGTTGAGCAGTTGAGCCTCTGGGCTTT 732062 Query 153385 CGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGG 153444 | |||| |||| || | ||||||||||| | |||||||| |||| ||||| | Sbjct 732061 CAAACGGGTGACGCATGAGAATGAAGGCGTCGGCTAAACCCTGGACTCCGATTCCGATCG 732002 Query 153445 GTCGATGCTTCTCGTTGCTGCGCCTCGCGCT--CGCTATGGGATAGTGATTGCGATCGAT 153502 | | || || ||| | | ||| ||| || || || |||| ||| ||||| Sbjct 732001 GCCTGTGGCGCTTGTTCGAGTTC-TCG-GCTTCCGGTACCGGGTAGTAGTTGATCTCGAT 731944 Query 153503 AATTTTGTTGAGGTTGCGCACCACCACTTTAGT----TATCGCCTTAAGTTTCTCGAAAT 153558 ||| ||||| ||||| || | ||||| || ||| ||| ||||||| |||| Sbjct 731943 AATCTTGTTCAGGTTTTTGACGATTACTTTGGTCACATAT-GCC---AGTTTCTTAAAAT 731888 Query 153559 CATAGGTCATTTCGTCGACG-CGTACGCATCGATTCACGGCAATAGACGCCAGATTACAG 153617 || | ||| || | | ||||| || || | ||| || || ||||| |||||| Sbjct 731887 CAAAAGTCCGCTCTGGGGTGACGTAC--ATG--TTGAGGGCGATGGAGGCCAGGTTACAG 731832 Query 153618 ACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTT 153677 || || ||| || | | |||| | || || |||| ||| ||||||||||| ||| Sbjct 731831 ACCGCTACCTCGTCCTTGCTGGTGTATTCAACAATTTCGGTGCACAGGTTGCTGCACTTT 731772 Query 153678 ATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTAC 153737 ||| ||||| ||| ||||| ||||| || | ||||| ||||||||| | |||||||| Sbjct 731771 ATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTAT 731712 Query 153738 GGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTA-TGCAGGTCCTGCGC--TC-G 153793 || || ||||| |||| || | ||| | || ||| | ||| || || Sbjct 731711 GGCGTTCCAGTCTCTGTCTGCGACTCAATGAT-GGCGTACCACAGCTGCTGAGCCTTCAC 731653 Query 153794 CACCCGC-TGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGT 153852 ||| ||| || | | |||||| |||| || | ||| || ||||||||| | Sbjct 731652 CACACGCTTGGCCTT----GCCCTCCTTCTCATACCTGGTGTAGAGCTTCTCAAACTCCT 731597 Query 153853 CGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGT 153912 | || |||| || | || || || || | ||||||||||| ||||| | || Sbjct 731596 CCCCCCAGCACTCATCCAGACCAGGGCAGGCGTTGGGACACATCAGAGACCAGTCCTGGT 731537 Query 153913 CGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCG 153972 | | || | |||||||||||| || | ||| | ||||| | ||||| | | Sbjct 731536 TGCTCTCCACTCTCTTCATGAACAGATCAGGGATCCACATGGCGTAGAAAAGGTCTCTGG 731477 Query 153973 CCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCGT 154032 || | |||||| || |||| ||||| | || | | | | ||| || Sbjct 731476 CCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCAAAGT 731417 Query 154033 GCCAGGGTTCAATGTAGACGGCCAGGGCACC---TTTACGCTTTCCGCCCTGATCGACGT 154089 ||||||| || | ||| | ||| | ||| || | | || || ||||| ||||||| Sbjct 731416 GCCAGGGCTCTAGGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCCCCCCTGGTCGACGT 731357 Query 154090 GGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGG 154149 ||| || | |||||| | || | || |||||| | || ||| | | | | ||||||| Sbjct 731356 AGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGTTGGAGTTTCCGTTGG 731297 Query 154150 TCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCA-----ATGCC 154204 | | ||| | ||| || | | ||||||| | | ||||| ||||| Sbjct 731296 TGCCAGAGATGTAGCTCCC-----TGTAGATCTGATGCAGCTGACCGCCACACCGATGCC 731242 Query 154205 GCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCT 154264 || | |||| || ||| || || | |||||| ||||||||| || ||||| Sbjct 731241 TCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCGTAGATGCCTTCAATGCT 731182 Query 154265 ATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGA 154324 ||||| | | |||||| ||| || ||| || || || || || || Sbjct 731181 GTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGAGGCCTGTTGGTCCCAGCGTT 731122 Query 154325 AAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGAT 154384 ||||| || || ||||| || ||| || | || || | ||| || || || Sbjct 731121 GAAGAGAGTCGGGGAGGCGTGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTCTCAAT 731062 Query 154385 GGCGTCTTCGATATCATCGCC--GTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGC 154442 || | |||||||| || | ||| || || | | ||| | |||||||||||||||| Sbjct 731061 CGCTGCATCGATATC--CGTCTTGTGGATTCCTACAGAGACTCTCATGAGCATGTGCTGC 731004 Query 154443 GGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAA 154502 || || ||||| ||| | || ||||||| || || | || || || ||| | Sbjct 731003 GGTCGCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTACGAACGCTCCAGAGTCTTGAAG 730944 Query 154503 CCGAAATACTTGTA 154516 ||||| | ||||| Sbjct 730943 CCGAAGAAGTTGTA 730930 >SEQ16359 Length=2539 Score = 123 bits (136), Expect = 2e-23 Identities = 161/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 138392 CTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAG 138451 ||| || ||||| || | || | | | |||||||| || |||||||||||| | | Sbjct 2539 CTCTCAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGG 2480 Query 138452 TACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATAC 138511 | || || || || || ||||| | | |||| ||||| || ||||| ||||| || | Sbjct 2479 TGCGACCATCTTCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGC 2420 Query 138512 CTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGA 138571 |||||||||| ||| ||| ||| | | || | ||||||| | | ||||||||| | Sbjct 2419 CTTCTTTGTCCTGGATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCA 2360 Query 138572 CCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | |||||||||||||| || || ||||| |||||||| Sbjct 2359 GGGTGATTGTTTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 2317 >seq1673 Length=142529 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||| || | || | | | |||||||| || ||||||||||| | Sbjct 266 CCTCCACGGAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 207 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || || ||||| | | |||| || | ||| ||||| ||||| Sbjct 206 AGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 147 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| ||| ||| ||| | | || | ||||||| | | ||||||| Sbjct 146 ATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACC 87 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || | || | || || ||||| || || || ||||| ||||||||| || Sbjct 86 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATGCCT 36 >seq510 Length=807390 Score = 102 bits (112), Expect = 8e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 || || ||||| | | |||| ||||| || ||||| ||||| || ||||||||||| | Sbjct 1575 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 1634 Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585 || ||| ||| | | || | ||||||| | | ||||||||| | || | |||||| Sbjct 1635 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 1694 Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||| || || ||||| |||||||| Sbjct 1695 CCAGTCAGGGTCTTCACAAAGATCTGCAT 1723 Score = 102 bits (112), Expect = 8e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 || || ||||| | | |||| ||||| || ||||| ||||| || ||||||||||| | Sbjct 4235 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 4294 Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585 || ||| ||| | | || | ||||||| | | ||||||||| | || | |||||| Sbjct 4295 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 4354 Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||| || || ||||| |||||||| Sbjct 4355 CCAGTCAGGGTCTTCACAAAGATCTGCAT 4383 >seq56 Length=1093683 Score = 89.7 bits (98), Expect = 5e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 153640 TGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGAT 153699 |||| | |||||||| | ||| |||||||| |||| ||| ||||| ||||||||| | Sbjct 335792 TGTATTCTACGATCTCTGTGCACAGGTTGCTAGATTTGATGGTGCCCAGATTTTGCTGGT 335851 Query 153700 TGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 153751 |||| || | ||||| ||||| ||| | |||||||||||| ||||| || Sbjct 335852 TGCTCTTCCTGTTGCAGGCGTCCTTGTACAGCATGTACGGTGTCCCGGTTTC 335903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496073733442080