Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq49 167 2e-36 seq56 98.7 9e-16 seq365 93.3 4e-14 >seq49 Length=1117640 Score = 167 bits (184), Expect = 2e-36 Identities = 489/744 (66%), Gaps = 26/744 (3%) Strand=Plus/Minus Query 146044 AGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGA 146103 ||| | |||| |||| ||||||| | ||||||||| || | ||||| | | Sbjct 732437 AGGTCTTTGAGCAGATGAGGGTTGACGATCTGAAACTCTCCCGACAGAACCCTGCGGGTG 732378 Query 146104 TACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTA 146163 || | |||||||||| | | |||| ||||||||||| || || ||||| || || | Sbjct 732377 TAGATGTTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 732318 Query 146164 GCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCC 146223 || || ||||| |||| ||||| ||| |||||||| ||| | || || ||| Sbjct 732317 GCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATTTTCTCC 732258 Query 146224 C---GTAGTTTGGACCAATTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAA 146280 | || || ||| | ||| | |||| || || | | | ||||||| Sbjct 732257 TTCAGCAGCTT---CCAGTCCCAGA---GATCGGTCGGCGTCTTCTCCCACATGTCGTAC 732204 Query 146281 TGCATAGTGCC---GCGGAACAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATC 146337 |||| |||| || || | ||| || |||||||| || || || ||| | | Sbjct 732203 TGCAGGATGCCCTTGCTGACCGGGGAGCC---CTCGTACGTCTCGTAGGGGCCG---AGC 732150 Query 146338 TTGGCC---AGTTCGCAGCTAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATG 146394 | |||| || |||||||| || |||||||| | |||| ||||| || ||| | Sbjct 732149 TCGGCCGCCAGCTCGCAGCTCGCCTCCAGAGCGGCGTAGTAAATGGTTTCGAAGATGTGG 732090 Query 146395 TAGTTGACGCTCCTG-GCCTCCTCGCTGTCGTAGGGGATATCGAGAAGCACAAAGGCGTC 146453 ||||| || || ||||| ||| || | ||| | | || | |||||||| Sbjct 732089 ATGTTGA-GCAGTTGAGCCTCTGGGCTTTCAAACGGGTGACGCATGAGAATGAAGGCGTC 732031 Query 146454 GGCGAGACCCTGTATCCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCC 146513 ||| | |||||| | |||| || | || | ||| |||||| |||| | || | Sbjct 732030 GGCTAAACCCTGGACTCCGATTCCGATCGGCCTGTGGCGCTTGTTCGAGTTCTCGGCTTC 731971 Query 146514 CGCAGTGGGATAGTGGTTGCTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGT 146573 || || |||| |||| | ||||| |||||||| || || |||| | ||| || Sbjct 731970 CGGTACCGGGTAGTAGTTGATCTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGT 731911 Query 146574 CAAACGATTCAGCAGGACATAGTCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTGAC 146633 || | ||| | | ||||| || | | | || |||| || |||||| Sbjct 731910 CACATATGCCAGTTTCTTAAAATCAAAAGTCC--GCTCTGGGGT-GACGTACATGTTGAG 731854 Query 146634 GGCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTC 146693 |||||| ||||||| |||||| || || |||||||||| | || | ||||| || Sbjct 731853 GGCGATGGAGGCCAGGTTACAGACCGCTACCTCGTCCTTGCTGGTGTATTCAACAATTTC 731794 Query 146694 GGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCA 146753 || ||| |||||||||||||| ||| |||||| ||| | ||||| || | ||||||| Sbjct 731793 GGTGCACAGGTTGCTGCACTTTATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCA 731734 Query 146754 GGGGTCCTTGTAGAGCATGTACGG 146777 || ||| ||||| |||||||| || Sbjct 731733 GGCGTCTTTGTACAGCATGTATGG 731710 >seq56 Length=1093683 Score = 98.7 bits (108), Expect = 9e-16 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 146686 ACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAAC 146745 || ||||| | ||| |||||||| | |||||| |||||| ||||| ||||| || | Sbjct 335800 ACGATCTCTGTGCACAGGTTGCTAGATTTGATGGTGCCCAGATTTTGCTGGTTGCTCTTC 335859 Query 146746 TTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTC 146789 ||||||||| ||||||||| |||||||||||| ||||||||| Sbjct 335860 CTGTTGCAGGCGTCCTTGTACAGCATGTACGGTGTCCCGGTTTC 335903 >seq365 Length=500478 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| ||| | || | || || || || || || ||||| || | ||||| | Sbjct 3819 CGCAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA 3878 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || ||||| ||||||| | |||||| || || || |||||||||||| Sbjct 3879 TCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCCTCCTTG 3938 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||||| | |||| |||||| | ||| || || | ||| | Sbjct 3939 TCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 3998 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || || || || || || || ||||| ||||||||| Sbjct 3999 GTCTTACCAGTGAGTGTCTTGACAAAGATCTGCATG 4034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475320026483360