Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq49 167 2e-36 seq56 91.5 1e-13 SEQ16359 84.2 2e-11 seq1673 84.2 2e-11 >seq49 Length=1117640 Score = 167 bits (184), Expect = 2e-36 Identities = 873/1381 (63%), Gaps = 28/1381 (2%) Strand=Plus/Plus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACG-GACG 122956 || || ||||| || || || ||||||||| | ||| || |||| | ||| |||| Sbjct 730987 AAAGTGGCCGAGCGACCGCAGCACATGCTCATGAGAGTCTCTGTAGGAATCCACAAGACG 731046 Query 122957 CGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGC 123016 || ||||| |||| || || ||| | || |||| | || | ||||| ||||| Sbjct 731047 -GATATCGATGCAGCGATTGAGACCTACAACCTGCTGTCAGAGAAGTGGTTCACCCACGC 731105 Query 123017 GAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCT 123076 || ||| | ||| ||| || || || ||||||| |||| || || |||| Sbjct 731106 CTCCCCGACTCTCTTCAACGCTGGGACCAACAGGCCTCAGCTGTCCAGCTGCTTCCTGCT 731165 Query 123077 CACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGAT 123136 | || || || |||||||| || ||||| || || || | || || | || Sbjct 731166 CGCCATGAAGGACGACAGCATTGAAGGCATCTACGACACGCTGAAGCAGTGTGCCCTCAT 731225 Query 123137 TTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCG 123196 ||||| | | || ||||| || ||| || | | | ||| || ||| Sbjct 731226 CTCCAAGTCAGCTGGAGGCATCGGTGTGGCGGTCAGCTGCATCAGATCTACAGGGAGCTA 731285 Query 123197 CATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAA 123256 |||| ||||| |||||| | || |||||||| |||||||| |||||||||| || Sbjct 731286 CATCTCTGGCACCAACGGAAACTCCAACGGGCTCGTCCCCATGCTGAGAGTTTACAACAA 731345 Query 123257 CGCCGTGCGGCACGTCGACCAGGGCGGCAAACGCAAA---GGCGCGATGGCGATCTATCT 123313 | | | || ||||||||||||| ||||| | | || || | || || || || Sbjct 731346 CACGGCACGCTACGTCGACCAGGGGGGCAACAAGAGACCCGGAGCCTTCGCCATGTACCT 731405 Query 123314 AGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGA 123373 ||| || |||||| |||| |||| ||| || | | | || |||| || ||| Sbjct 731406 AGAGCCCTGGCACTTTGACGTGTTCGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGA 731465 Query 123374 AGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACG 123433 || ||| ||| | || | || ||||| | ||| | || ||| |||| ||| | Sbjct 731466 GGAGCAGAGGGCCAGAGACCTTTTCTACGCCATGTGGATCCCTGATCTGTTCATGAAGAG 731525 Query 123434 CGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGA 123493 || | | || | ||||| || ||||||||| | || || || || || Sbjct 731526 AGTGGAGAGCAACCAGGACTGGTCTCTGATGTGTCCCAACGCCTGCCCTGGTCTGGATGA 731585 Query 123494 CGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAA--CAG 123551 | || | ||||||| || | ||| | || ||| || ||||| || Sbjct 731586 GTGCTGGGGGGAGGAGTTTGAGAAGCTCTACACCAGGTATGAGAAGGAGGGCAAGGCCAA 731645 Query 123552 GTTAGTCAGGTTCCGGCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTCGAAACC 123611 | || ||| ||| | | ||| | || || || | || || || Sbjct 731646 GCGTGT--GGTGAAGGCTCAGCAGCTGTGGTACGCCATCATTGAGTCGCAGACAGAGACT 731703 Query 123612 GGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTG 123671 |||||||| |||||||| ||||||||||||||||||||||| | ||| ||| || || Sbjct 731704 GGAACGCCATACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAATCTG 731763 Query 123672 GGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACA---GCGATGCCGAT 123728 || || ||||| || || || || ||| |||||||| | ||||||| || | | ||| Sbjct 731764 GGCACCATAAAGTGCAGCAACCTGTGCACCGAAATTGTTGAATACACCAGCAAGGACGAG 731823 Query 123729 CAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGTCG----AAAACGG 123784 || || || ||||| |||| || || | | || | |||| | | ||| Sbjct 731824 ---GTAGCGGTCTGTAACCTGGCCTCCATCGCCCTCAACATGTACGTCACCCCAGAGCGG 731880 Query 123785 CGCTTTTAATTTCCAAACGCT--CAAACGCATAACAAAAACTGTAGTAAAGAATTTGAAC 123842 ||||| |||| | | || || | | | || ||| | || || || ||||| Sbjct 731881 A-CTTTTGATTTTAAGAAACTGGCATATG--TGACCAAAGTAATCGTCAAAAACCTGAAC 731937 Query 123843 AAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACAC 123902 || |||||||| | || | || || | |||||| || || | ||| Sbjct 731938 AAGATTATCGAGATCAACTACTACCCGGTACCGGAAGCCGAGAACTCGAACAAGCGCCAC 731997 Query 123903 AGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCG 123962 || ||| ||||| | || | || || || |||||||| || | | |||| ||| Sbjct 731998 AGGCCGATCGGAATCGGAGTCCAGGGTTTAGCCGACGCCTTCATTCTCATGCGTCACCCG 732057 Query 123963 TACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGC 124022 | |||||| || || | |||| || | || || |||||| ||||| |||| | Sbjct 732058 TTTGAAAGCCCAGAGGCTCAACTGCTCAACATCCACATCTTCGAAACCATTTACTACGCC 732117 Query 124023 GCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGC 124082 ||| |||||||||||||||| || ||| | |||| | ||||| | |||| |||| Sbjct 732118 GCTCTGGAGGCGAGCTGCGAGCTGGCGGCCGAGCTCGGCCCCTACGAGACGTACGAGGGC 732177 Query 124083 AGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTG 124142 ||||| ||| || || ||||||||||||||||| | || ||||| || | Sbjct 732178 TCCCCGGTCAGCAAGGGCATCCTGCAGTACGACATGTGGGAGAAGACGCCGACCGATCTC 732237 Query 124143 TGGGACTGGAGCGTTTTAAAACAACGCATATCG--ACGCACGGTTTGCGTAACTCGCTGT 124200 |||||||||| | | || | | | |||| | || || || | ||| ||| Sbjct 732238 TGGGACTGGAAGCTGCTGAAGGA--GAAAATCGCCAAACATGGCGTGAGGAACAGCCTGC 732295 Query 124201 TGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCG 124260 || |||| ||||| || || |||| || || || | || |||||||| ||| ||| Sbjct 732296 TGCTGGCCCCGATGCCCACAGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCG 732355 Query 124261 A 124261 | Sbjct 732356 A 732356 >seq56 Length=1093683 Score = 91.5 bits (100), Expect = 1e-13 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647 || ||||| |||| |||||||| || ||||||||||| ||||| |||||||||||| Sbjct 335921 ATCATCGAGTCACAGACAGAAACCGGGACACCGTACATGCTGTACAAGGACGCCTGCAAC 335862 Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATT 123707 ||||| | ||| ||| || |||| || || |||| ||| || || ||| | || || Sbjct 335861 AGGAAGAGCAACCAGCAAAATCTGGGCACCATCAAATCTAGCAACCTGTGCACAGAGATC 335802 Query 123708 ATCGAATACA 123717 | ||||||| Sbjct 335801 GTAGAATACA 335792 >SEQ16359 Length=2539 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187 || ||| || || || || || ||||| ||||| || || ||| || ||| | ||| Sbjct 2529 CAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATC 2470 Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247 || | || || || || | |||| ||||||||||| || || ||||||||||| || Sbjct 2469 TTCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTC 2410 Query 45248 TTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307 || || ||| ||| | || | ||||||| | ||| || || || || | || Sbjct 2409 CTGGATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGT 2350 Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| || || || || || ||||| || |||||| Sbjct 2349 TTTACCAGTCAGGGTCTTCACAAAGATCTGCATC 2316 >seq1673 Length=142529 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171 ||||||| ||||| | || ||| || || || || || ||||| ||||| || || || Sbjct 268 TTCCTCCACGGAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 209 Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 | ||| ||| |||| || || || || | |||| | |||||||| || | Sbjct 208 ACAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGAG 149 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGA 45291 | ||||||||||| ||||| || ||| ||| | || | ||||||| | ||| | Sbjct 148 GGATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCA 89 Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || || || | || ||||| || || || || ||||| || ||||| Sbjct 88 CCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 40 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451831359683440