Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017-
04-25] 30,414 sequences; 991,584,656 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq49 145 9e-30
seq277 91.5 2e-13
seq56 86.0 8e-12
seq4 82.4 9e-11
>seq49
Length=1117640
Score = 145 bits (160), Expect = 9e-30
Identities = 522/800 (65%), Gaps = 16/800 (2%)
Strand=Plus/Minus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
||||||||| | ||||| | || | | |||| ||||| |||| ||| ||||| ||||||
Sbjct 732377 TAGATGTTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 732318
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
||||||||||| || |||| || |||||||| | | || || |||
Sbjct 732317 GCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATTTTCTCC 732258
Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGC-TTTGTCTCCCCCTCCCACATATCAAACTGGAG 116081
|| || | |||||| || || | | | | | ||||||||| || |||| ||
Sbjct 732257 TTCAGCAGCTTCCAGTCCCAG-AGATCGGTCGGCGTCTTCTCCCACATGTCGTACTGCAG 732199
Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141
||| || | | | || || ||||| | ||||| || ||||| | ||||||
Sbjct 732198 GATGCCCTTGCTGACCGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAGCTCGGCCGCCAG 732139
Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201
||| |||||||||| || || |||| || || || || || ||| | || | ||
Sbjct 732138 CTCGCAGCTCGCCTCCAGAGCGGCGTAGTAAATGGTTTCGAAGATGTGGATGTTGA--GC 732081
Query 116202 -CTTG-GCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCT 116259
||| ||||| | ||||||| | |||| | ||| || | || || | |||
Sbjct 732080 AGTTGAGCCTCTGGGCTTTCAAACGGGTGACGCATGAGAATGAAGGCGTCGGCTAAACCC 732021
Query 116260 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT-TCGAGCGGTCTCCACGGG 116318
||||| |||| || || || | || | | | || || || ||| || | || ||
Sbjct 732020 TGGACTCCGATTCCGATCGGCCTGTGGCGCTTGTTCGAGTTCTCG-GCTTCCGGTACCGG 731962
Query 116319 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 116378
|| | || | ||||||| | | || || |||||| || || || || | | |||
Sbjct 731961 GTAGTAGTTGATCTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTCACAT-ATG 731903
Query 116379 -AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTG 116437
|| || | |||||||| | || |||| |||| ||| | |||||||| |
Sbjct 731902 CCAGTTTCTTAAAATCAAAAGTCCG---CTCTGGGGTGACGTACATGTTGAGGGCGATGG 731846
Query 116438 ACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACA 116497
| ||||| ||||| || | ||| ||||| ||||| || | |||||| || ||||
Sbjct 731845 AGGCCAGGTTACAGACCGCTACCTCGTCCTTGCTGGTGTATTCAACAATTTCGGTGCACA 731786
Query 116498 AATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCT 116557
|| | ||| |||||||||| |||| || || ||| |||| || || || |
Sbjct 731785 GGTTGCTGCACTTTATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTT 731726
Query 116558 TGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CA 116616
|||| ||||| |||||||| || ||||| || || |||| | || || | ||| | |
Sbjct 731725 TGTACAGCATGTATGGCGTTCCAGTCTCTGTCTGCGACTCAATGATGGCGTACCACAGCT 731666
Query 116617 TCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCC 116676
| | | || || || ||||| ||||||| ||| ||| | |||||||| |
Sbjct 731665 GCTGAGCCTTCACCACACGC-TTGGCCTTGCCCTCCTTCTCATACCTGGTGTAGAGCTTC 731607
Query 116677 TCAAACTCTTCACCCACAGC 116696
|||||||| || ||| ||||
Sbjct 731606 TCAAACTCCTC-CCCCCAGC 731588
Score = 82.4 bits (90), Expect = 9e-11
Identities = 114/160 (71%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 117027 CATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGAT 117086
|| ||| || || || || |||| ||||| | || |||| | | || || |||||||
Sbjct 731253 CACACCGATGCCTCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCGTAGAT 731194
Query 117087 CCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGG 117146
|| || || ||| |||| | |||| ||||||||||| |||| || |||||
Sbjct 731193 GCCTTCAATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGAGGCCTGTT 731134
Query 117147 TGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 117186
|| |||||||||||||| || || | |||||| |||||
Sbjct 731133 GGTCCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAAC 731094
>seq277
Length=566994
Score = 91.5 bits (100), Expect = 2e-13
Identities = 100/133 (75%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598
||||||| | | |||||| || || |||||| ||| || ||||| || || | |||||
Sbjct 257392 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 257333
Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658
||| |||||| || ||| || || |||||||||||||| |||||||| ||||| |
Sbjct 257332 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGG 257273
Query 127659 CAAATAGACGCTC 127671
| | | ||||||
Sbjct 257272 CCACAACACGCTC 257260
Score = 91.5 bits (100), Expect = 2e-13
Identities = 100/133 (75%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598
||||||| | | |||||| || || |||||| ||| || ||||| || || | |||||
Sbjct 272204 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 272263
Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658
||| |||||| || ||| || || |||||||||||||| |||||||| ||||| |
Sbjct 272264 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGG 272323
Query 127659 CAAATAGACGCTC 127671
| | | ||||||
Sbjct 272324 CCACAACACGCTC 272336
>seq56
Length=1093683
Score = 86.0 bits (94), Expect = 8e-12
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
||||||||| | ||||| | ||||| | |||||||||| |||| ||| || || || ||
Sbjct 334827 TAGATGTTGCTGGTGTAAGCCTCAATGGACTCATTGTTGCCCAGGATCTGAGCAGTAGAA 334886
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994
|||||||||||||| |||| || || |||||
Sbjct 334887 GCTGTGGGCATGGGGGCCAAAAGCAGACTGTT 334918
>seq4
Length=2013838
Score = 82.4 bits (90), Expect = 9e-11
Identities = 78/97 (80%), Gaps = 2/97 (2%)
Strand=Plus/Minus
Query 127553 ATGAGTTCATTCGAG-AAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAAT 127611
|| |||||||| ||| ||| | ||||| ||||| | || | |||||| ||||| | ||
Sbjct 553665 ATCAGTTCATTGGAGTAAGTA-AGACCAGGCATCAAGCCTCTCTTCTTTAACCAATAGAT 553607
Query 127612 CGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 127648
||| ||||||||||||||||||||| |||||||||
Sbjct 553606 GGCAGCAAATGAGCCAGAGAAGAAGATGCCCTCCACA 553570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613273959900240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |