Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq49 196 8e-45 seq56 89.7 8e-13 >seq49 Length=1117640 Score = 196 bits (216), Expect = 8e-45 Identities = 581/885 (66%), Gaps = 16/885 (2%) Strand=Plus/Minus Query 204884 TCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGAC 204943 || || || |||||||||| ||| | |||||| | |||| || ||||||||| | Sbjct 731804 TCAACAATTTCGGTGCACAGGTTGCTGCACTTTATGGTGCCCAGATTCTGCTGGTTGCTC 731745 Query 204944 TTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCGC 205003 || | ||| |||| ||| ||||||| |||| | ||| |||| |||| |||| || | Sbjct 731744 TTCCTGTTGCAGGCGTCTTTGTACAGCATGTATGGCGTTCCAGTCTCTGTCTGCGA---C 731688 Query 205004 AGAATG-TGG-GT-CCACAATTCGCGAGCCT---CCACTTGCTTCACGTACATCCCTTGA 205057 |||| ||| || ||||| | |||||| |||| |||| | | | || | Sbjct 731687 TCAATGATGGCGTACCACAGCTGCTGAGCCTTCACCACACGCTTGGCCT---TGCCCTCC 731631 Query 205058 GACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTA-CACGTCCATCAGCCCTGG 205116 ||| || | ||||| ||| | |||| || || | ||| || ||| || || Sbjct 731630 TTCTCATACCTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCAC-TCATCCAGACCAGG 731572 Query 205117 ACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAG 205176 || |||||||||||||||||||| ||| | | | ||| |||| ||| ||||| Sbjct 731571 GCAGGCGTTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAACAG 731512 Query 205177 GTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTT 205236 || |||||||| | |||| || || || | |||||| | || | ||| ||| Sbjct 731511 ATCAGGGATCCACATGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTT 731452 Query 205237 CTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCA 205295 ||| |||| ||||| ||| || | | ||| |||||| ||||||| ||| ||| | Sbjct 731451 CTTCTTCAGCTCCAG-GAAGTCGAACACGTCAAAGTGCCAGGGCTCTAGGTACATGGCGA 731393 Query 205296 TTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTC 205355 || || || |||||||| || |||||||| || ||| | | | |||| |||||| Sbjct 731392 AGGCTCCGGGTCTCTTGTTGCCCCCCTGGTCGACGTAGCGTGCCGTGTTGTTGTAAACTC 731333 Query 205356 GCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAG 205415 |||||| || || || ||||||| | | ||||| |||| |||| ||| || Sbjct 731332 TCAGCATGGGGACGAGCCCGTTGGAGTTTCCGTTGGTGCCAGAGATGTAGCTCCCTGTAG 731273 Query 205416 CCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACT 205475 || | | | || ||| | || || || |||| |||||| ||| |||| |||| Sbjct 731272 ATCTGATGCAGCTGACCGCCACACCGATGCCTCCAGCTGACTTGGAGATGAGGGCACACT 731213 Query 205476 CTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACG 205535 | ||| ||| |||||||||| | ||| |||||| || | | ||| |||| Sbjct 731212 GCTTCAGCGTGTCGTAGATGCCTTCAATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGC 731153 Query 205536 AAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGC 205595 | ||||| | |||||| || |||| |||||| || ||| ||||||| |||| | Sbjct 731152 TGGACAGCTGAGGCCTGTTGGTCCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAACC 731093 Query 205596 GCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATCGAAGCCGTGAATAC 205655 |||||| || |||||||||| | | | || | ||| ||| || | Sbjct 731092 ACTTCTCTGACAGCAGGTTGTAGGTCTCAATCGCTGCATCGATATCCGTCTTGTGGATTC 731033 Query 205656 CTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATCACCCTCTCGTTCACCTTGA 205715 ||| | || ||||||| | ||| || |||| ||| ||| | |||| | ||| | Sbjct 731032 CTACAGAGACTCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTGATCTTCA 730973 Query 205716 GCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAAGTTGAAGG 205760 |||| || | | ||| || || || | | || |||||| ||| Sbjct 730972 GCAGGTACGAACGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTAGG 730928 Score = 161 bits (178), Expect = 2e-34 Identities = 306/440 (70%), Gaps = 18/440 (4%) Strand=Plus/Minus Query 204178 CAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTT 204237 ||| || ||||||| ||||||||| ||||| ||||| |||| |||||| | | |||| | Sbjct 732426 CAGATGAGGGTTGACGATCTGAAACTCTCCCGACAGAACCCTGCGGGTGTAGATGTTGCT 732367 Query 204238 GGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCAT 204297 |||| | | ||||| | |||||||||||| | ||||| |||||| ||| |||||||| Sbjct 732366 GGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCTGTGGGCAT 732307 Query 204298 GGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGT 204357 || ||||| |||||| ||| | ||| || | ||| || | |||||| | Sbjct 732306 CGGGGCCAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATTTTCTCCTTCAGCAGCTT 732247 Query 204358 CCAGTC---GTGCATCGCACTGGGT-TTCACGCCCCACATGTCGAACTGAAAGATGCCTT 204413 |||||| | | |||| | | || ||| ||||||||||| |||| | |||||| | Sbjct 732246 CCAGTCCCAGAG-ATCGGTCGGCGTCTTC---TCCCACATGTCGTACTGCAGGATGCCCT 732191 Query 204414 GACTGACTGGGCTGCCCTTGTACGTCGGATA-AGGCTGATCCTCTTCTGCCAGCTTGCAC 204472 ||||| ||| ||||| ||||||| || ||| || ||| | ||||||| ||| Sbjct 732190 TGCTGACCGGGGAGCCCTCGTACGTCTCGTAGGGGCCGA-GCTCGGCCGCCAGCTCGCAG 732132 Query 204473 GAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCG-GC 204531 || ||| ||| ||||| ||||| || ||||| || | | || | | | | || Sbjct 732131 CTCGCCTCCAGAGCGGCGTAGTAAATGGTTTCGAAGATGTGGATG-TTGAGCAGTTGAGC 732073 Query 204532 CTCCGTTCCGTCAAACGCCAGACCC---AGCATGGCAAACACGTCCGCCAAGCCCTGCAC 204588 ||| | | ||||||| ||| | || ||| || |||| || || ||||| || Sbjct 732072 CTCTGGGCTTTCAAACGGGTGACGCATGAGAATG---AAGGCGTCGGCTAAACCCTGGAC 732016 Query 204589 TCCGATTCCCAACGGTCTGT 204608 ||||||||| | ||| |||| Sbjct 732015 TCCGATTCCGATCGGCCTGT 731996 Score = 116 bits (128), Expect = 6e-21 Identities = 119/153 (78%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| ||||| | ||||||| | |||||||| |||||| || || |||| Sbjct 733293 CCTGCTTCCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGCTCTGCGATGT 733234 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028 | |||||||| |||||||| ||||||||| | |||||| || || || ||||| || | Sbjct 733233 GGATGTTCAGCGACTGGCTCTGGTCGATGTA-GGCGCCACGGTCGGCCGCCATCTTTAGT 733175 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 ||||||||||| || || |||||||| || ||| Sbjct 733174 ATGGTCTTCTGGGAGATTTCCCACACGGTTTTG 733142 >seq56 Length=1093683 Score = 89.7 bits (98), Expect = 8e-13 Identities = 110/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 203914 CTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAAT 203973 || ||| || || | ||||||| | |||||||| ||| || || || || || || Sbjct 334326 CTTCCAACCATAGAAGTGCATGCTGGTCAGTTTGCCATAGTTTGGCTCAGCAATATGGAT 334385 Query 203974 GTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGG 204032 || ||||||||||| ||||| ||| |||| || |||||||| ||||| |||| || | Sbjct 334386 ATTTAGAGACTGGCTCTGGTCAATG-TAGGCACCGCGATCTGCCGCCATCTTGAGAACTG 334444 Query 204033 TCTTCTGCGAAATCTCCCACACCGTCTT 204060 ||||||| || || ||||| || || || Sbjct 334445 TCTTCTGGGAGATTTCCCAGACTGTTTT 334472 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 204189 TGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTT 204248 || ||| |||||| ||||| || ||||||| || ||| | | |||| ||||| | | | Sbjct 334789 TGCTGACCTGAAACTCTCCTGAGAGCACCCTGCGTGTGTAGATGTTGCTGGTGTAAGCCT 334848 Query 204249 CGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGA 204308 | | | ||| |||||||| | |||||||| || || ||||||||||| |||| | Sbjct 334849 CAATGGACTCATTGTTGCCCAGGATCTGAGCAGTAGAAGCTGTGGGCATGGGGGCCAAAA 334908 Query 204309 GCAGGGAGTTGCGCACACCGT 204329 |||| ||| | |||||||| Sbjct 334909 GCAGACTGTTCCTCACACCGT 334929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794852901871840