Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq49 197 2e-45 seq277 89.7 6e-13 >seq49 Length=1117640 Score = 197 bits (218), Expect = 2e-45 Identities = 956/1496 (64%), Gaps = 52/1496 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||| | ||| | | || ||||| | ||||| ||| | | Sbjct 731002 CCGCAGCACATGCTCATGAGAGTCTCTGTAGGAATCCACAAGACGGATATCGATGCAGCG 731061 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| || | |||| | || ||||| |||||| | || || ||||| Sbjct 731062 ATTGAGACCTACAACCTGCTGTCAGAGAAGTG-GTTCACCCACGCCTCCCCGACTCTCTT 731120 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||||||||| || || || || ||||||| || ||||| | || | ||||| || Sbjct 731121 CAACGCTGGGACCAACAGGCCTCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGACGA 731180 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | ||||| |||| ||| || | | ||||||| ||||| |||| ||||| Sbjct 731181 CAGCATTGAAGGCATCTACGACACGCTGAAGCAGTGTGCCCTCATCTCCAAGTCAGCTGG 731240 Query 111851 TGGTATCGGGATG-----CACATCCAT--GATGT-CAGAGC-CAACAAGTCTCGTATTAG 111901 || ||||| || || | ||| ||| | ||| | | ||| ||| Sbjct 731241 AGGCATCGGTGTGGCGGTCAGCTGCATCAGATCTACAGGGAGCTACATCTCT-------- 731292 Query 111902 AGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 111961 || || || || | || | || | | || ||||| | || | ||| ||| || Sbjct 731293 -GGCACCAACGGAAACTCCAACGGGCTCGTCCCCATGCTGAGAGTTTACAACAACACGGC 731351 Query 111962 GCGCTATGTAAACCAAGCTGGGCGTCGCAAG----GGATCTATCGCAGTCTATCTTGAGC 112017 ||||| || |||| | |||| | || ||| | |||| | || || |||| Sbjct 731352 ACGCTACGTCGACCAGGG-GGGCAACAAGAGACCCGGAGCCTTCGCCATGTACCTAGAGC 731410 Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077 | |||||| || | | || ||||| ||| || ||| ||| | |||||| Sbjct 731411 CCTGGCACTTTGACGTGTTCGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGAGGAGC 731470 Query 112078 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137 | || | | || || |||| ||| | ||||| || ||||| |||||||||||||| Sbjct 731471 AGAGGGCCAGAGACCTTTTCTACGCCATGTGGATCCCTGATCTGTTCATGAAGAGAGT-- 731528 Query 112138 AGGAGAGTGGCAAT---TGGTCTCTCTTTTGTCCAGACAAGGCA---CCCGGTCTCTCCG 112191 |||||| | | |||||||| | ||||| ||| || || ||||| | Sbjct 731529 -GGAGAGCAACCAGGACTGGTCTCTGATGTGTCC---CAACGCCTGCCCTGGTCTGGATG 731584 Query 112192 A-TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCG 112250 | ||| | ||| ||||||||||| |||||||| | ||| ||| | || | ||| Sbjct 731585 AGTGCTGGGGG-GAGGAGTTTGAGAAGCTCTACACCAGGTATGAGAAGGAGGGCAAGGCC 731643 Query 112251 ACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGAC 112309 | ||| |||| ||| | ||||| | || || | |||| || || ||||| Sbjct 731644 AA-GCGTGTGGTGAAGGCTCAGCAGCTGTGGTACGCCATCATTGAGTCGCAGACAGAGAC 731702 Query 112310 TGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTT 112369 ||| || ||||| ||||| |||||||||||||| ||| ||||| || || ||||| | Sbjct 731703 TGGAACGCCATACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAATCT 731762 Query 112370 GGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGA 112429 ||| || ||| | |||||| || || ||||| | |||| || ||| || || Sbjct 731763 GGGCACCATAAAGTGCAGCAACCTGTGCACCGAAATTGTTGAATACACCAGCAAGGACGA 731822 Query 112430 GACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAA 112489 | || || |||||||| || || ||||| ||| || ||| || |||||| Sbjct 731823 GGTAGCGGTCTGTAACCTGGCCTCCATCGCCCTCAACATGTACGTCACCCCAGAG---CG 731879 Query 112490 GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAG 112549 ||| ||||||| | | ||||| | || || ||| || |||||||| |||| Sbjct 731880 GACTTTTGATTTTAAGAAACTGGCATATGTGACCAAAGTAATCGTCAAAAACCTGAACAA 731939 Query 112550 AGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCG 112609 |||| || | || | ||||| || | || || || || | | | ||| | Sbjct 731940 GATTATCGAGATCAACTACTACCCGGTACCGGAAGCCGAGAACTCGAACAAGCGCCACAG 731999 Query 112610 TCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATT 112669 || || || |||| ||||| ||| | || || | |||||||| || ||| | || Sbjct 732000 GCCGATCGGAATCGGAGTCCAGGGTTTAGCCGACGCCTTCATTCTCATGCGTCACCCGTT 732059 Query 112670 TGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGC 112729 ||| | || || | |||| | || || || || || || ||||||| Sbjct 732060 TGAAAGCCCAGAGGCTCAACTGCTCAACATCCACATCTTCGAAACCATTTACTACGCCGC 732119 Query 112730 TCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789 ||| |||||||| | ||| |||| | | || || || || || | ||||| || Sbjct 732120 TCTGGAGGCGAGCTGCGAGCTGGCGGCCGAGCTCGGCCCCTACGAGACGTACGAGGGCTC 732179 Query 112790 TCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCA 112846 || | ||| |||||| | || || | || ||||||| || || || | | || Sbjct 732180 CCCGG--TCAGCAAGGGCATCCTGCAGTACGACATGTGGG-AGAAGACGCCGACCGATCT 732236 Query 112847 CTACGACTGGGACGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 112905 || |||| ||| ||| || ||||| ||| | | || | | ||||| || Sbjct 732237 CTGGGACT-GGAAGCTGCTGAAGGAGAAAATCGCCAAACATGGCGTGAGGAACAGCCTGC 732295 Query 112906 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 112965 || |||| || ||||| |||||||||||||| || ||| |||| || || || | | | | Sbjct 732296 TGCTGGCCCCGATGCCCACAGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCG 732355 Query 112966 AACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 113025 || ||||||| | |||||||| | || || ||||||||||| ||| |||| Sbjct 732356 AAGCCTACACCAGCAACATCTACACCCGCAGGGTTCTGTCGGGAGAGTTTCAGATCGTCA 732415 Query 113026 ACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 113081 || ||||| | | ||||| | |||| || || ||| | |||| |||||| Sbjct 732416 ACCCTCATCTGCTCAAAGACCTGACGGAGAGAGGACTGTGGAACGAGGAGATGAAG 732471 >seq277 Length=566994 Score = 89.7 bits (98), Expect = 6e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||| ||||||||||||||||||||| || || | ||||| |||||| |||| Sbjct 257284 GTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGCTGAAGAAGAGAGGC 257343 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 102312 || ||||| || || ||||||||||||||| ||| | ||||||| Sbjct 257344 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGG 257392 Score = 89.7 bits (98), Expect = 6e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||| ||||||||||||||||||||| || || | ||||| |||||| |||| Sbjct 272312 GTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGCTGAAGAAGAGAGGC 272253 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 102312 || ||||| || || ||||||||||||||| ||| | ||||||| Sbjct 272252 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGG 272204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620506409258080