Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value SEQ16359 134 3e-26 seq1673 129 1e-24 seq365 116 8e-21 seq510 93.3 9e-14 >SEQ16359 Length=2539 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || || ||||| || |||||||| || || || ||||| |||| || || Sbjct 2538 TCTCAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 2479 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| ||||||||||| || ||||| || ||||| ||||| ||||| ||||| Sbjct 2478 GCGACCATCTTCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCC 2419 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||| || || ||| || || ||||| |||||||| ||||| || || Sbjct 2418 TTCTTTGTCCTGGATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAG 2359 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | || || || |||| || || || || | ||||| Sbjct 2358 GGTGATTGTTTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 2317 >seq1673 Length=142529 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| || | || || | |||||||| Sbjct 248 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 189 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || ||||| || | || ||||| ||||| ||||||||||||||||| Sbjct 188 AGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTGTCTTGG 129 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| || || |||||||||||||| ||||| || ||||| | ||||| Sbjct 128 ATCTTTGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTG 69 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 68 CCAGTGAGGGTCTTCACAAAGATCTGCAT 40 >seq365 Length=500478 Score = 116 bits (128), Expect = 8e-21 Identities = 123/161 (76%), Gaps = 6/161 (4%) Strand=Plus/Plus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| |||||||| || |||||||| | | || |||||||| |||||||||||| Sbjct 9655 CCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCT 9714 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGG 195099 ||||| || ||||| |||||| |||||||||||||| ||| ||||| || ||| Sbjct 9715 TTGTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTC---ACTGGGCTCCACCTCTAGG 9771 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || | ||||| || || | ||||| Sbjct 9772 GTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 9812 Score = 111 bits (122), Expect = 3e-19 Identities = 149/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || ||||| |||||||| || ||||| || | || || | |||||||| |||||| Sbjct 4118 TGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGC 4177 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| | | || ||||| |||||||||||||| ||||| || || || Sbjct 4178 TTTCCAGCGAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTG 4237 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCT 195114 || || |||||||||||||| ||| || || || ||||| | || || || Sbjct 4238 GCTTTCACATTCTCAATGGTGTC---ACTGGGCTCAACCTCGAGGGTGATGGTTTTACCA 4294 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | ||||| Sbjct 4295 GTGAGTGTCTTGACGAAGATCTGCAT 4320 Score = 107 bits (118), Expect = 4e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||||| || || || || ||||| || | || || | || ||||| Sbjct 9178 ACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCTTCC 9237 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| | | || ||||| || ||||||||||||||||| || Sbjct 9238 AGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGG 9297 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || |||||| ||||| |||||||| Sbjct 9298 ATCTTAGCCTTGACATTCTCGATGGTGTC 9326 Score = 104 bits (114), Expect = 5e-17 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||||| || || || || ||||| || | || || | || || || Sbjct 8950 ACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCC 9009 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | | || || ||||| ||||||||||||||||| || Sbjct 9010 AGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCCTGG 9069 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || || |||||||| |||||||| ||| || || || ||||| | || Sbjct 9070 ATCTTAGCTTTCACGTTCTCGATGGTGTC---ACTGGGCTCAACCTCCAGGGTGATGGTT 9126 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | || || ||||| | ||||| Sbjct 9127 TTACCAGTGAGTGTCTTGACGAAGATCTGCAT 9158 >seq510 Length=807390 Score = 93.3 bits (102), Expect = 9e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || ||||| || ||||| ||||| ||||| |||||||||||||| || Sbjct 1575 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 1634 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| || || ||||| |||||||| ||||| || ||||| | || || Sbjct 1635 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 1694 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || || || | ||||| Sbjct 1695 CCAGTCAGGGTCTTCACAAAGATCTGCAT 1723 Score = 93.3 bits (102), Expect = 9e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || ||||| || ||||| ||||| ||||| |||||||||||||| || Sbjct 4235 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 4294 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| || || ||||| |||||||| ||||| || ||||| | || || Sbjct 4295 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 4354 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || || || | ||||| Sbjct 4355 CCAGTCAGGGTCTTCACAAAGATCTGCAT 4383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109049257903538