Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq637 129 5e-24 seq484 113 4e-19 seq327 109 4e-18 seq2193 95.1 1e-13 seq365 87.8 1e-11 >seq637 Length=384066 Score = 129 bits (142), Expect = 5e-24 Identities = 382/585 (65%), Gaps = 12/585 (2%) Strand=Plus/Plus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || || || ||| | || ||||| || |||||||| |||| || |||| ||||| Sbjct 303251 ATTGGCATCGATCTGGGCACCACCTACTCCTGTGTTGGGGTTTTCCAGCATGGCAAAGTG 303310 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 || || || ||||| || || || ||||| || ||||| ||||| | ||||| || Sbjct 303311 GAGATCATCGCCAACGACCAGGGCAACAGGACAACTCCCAGCTATGTGGCCTTCACCGAC 303370 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 || || | | |||| || || || || | |||| | | ||||| ||||| || Sbjct 303371 ACAGAGCGGCTCATTGGAGACGCTGCCAAGAACCAAGTCGCCATGAATCCCACCAACACA 303430 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 | |||||||| ||||| | || ||||||| ||||| || ||| ||| ||| | || Sbjct 303431 GTCTTTGATGCCAAACGGCTCATCGGAAGAAAGTTTAACGACTCGGTTGTCCAGTCCGAC 303490 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT--A 550292 ||||||| ||||||||| | | | | | ||||| || | | | || | | Sbjct 303491 ATGAAGCTCTGGCCTTTCAAGGTGATCAGCGACAACGGAAAGCCCAA-AGTCCAGGTGGA 303549 Query 550293 CTCATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAATTTCATCTATGGTTTTA 550348 | || |||| | | ||| || | || ||| | || || || ||||| | Sbjct 303550 GT-ATAAAGG----GGAGACCAAGGCGTTCTATCCTGAAGAGATCTCCTCCATGGTCCTG 303604 Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408 |||| ||||| | | || || | | || || || || | ||||| || Sbjct 303605 GTGAAGATGAAGGAGATCGCTGAGGCCTACCTGGGACAGAGGGTGTCGAACGCAGTCATC 303664 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || ||||| |||||||| ||| | ||||| ||||| ||||| || || Sbjct 303665 ACAGTGCCGGCTTATTTCAATGACTCCCAAAGACAAGCCACTAAGGATGCCGGTGTGATC 303724 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||||| |||||| | | || |||||||| || || || || || | || || || Sbjct 303725 TCTGGACTAAATGTTTTGAGGATCATCAATGAGCCCACAGCAGCGGCCATCGCTTACGGT 303784 Query 550529 CTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGAT 550573 || |||||| ||| ||| | || || |||||||||||| Sbjct 303785 CTGGATAAAGGTAAAAGAGGAGAGCGCAACGTGCTCATCTTTGAT 303829 >seq484 Length=430722 Score = 113 bits (124), Expect = 4e-19 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || || ||||| || || || || |||||||| || |||||||| || ||||||| Sbjct 385306 ATGCGGTCATCACTGTTCCTGCTTACTTCAATGACTCCCAGCGTCAAGCCACCAAAGATG 385247 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 ||||| || |||| |||||||| || || || |||||||| || |||||||| || Sbjct 385246 CTGGAACCATCTCTGGCCTTAATGTGCTGCGCATCATCAATGAGCCCACTGCTGCAGCCA 385187 Query 550518 TTGCATATGGACTTGATAAA 550537 |||| ||||| || || ||| Sbjct 385186 TTGCTTATGGCCTGGACAAA 385167 >seq327 Length=760595 Score = 109 bits (120), Expect = 4e-18 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || ||||| || ||||| || || || |||||||| || || || || || || |||||| Sbjct 138076 GCTGTAATCACAGTACCTGCCTACTTCAATGACTCCCAGCGCCAGGCCACAAAGGATGCT 138135 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || || |||| || |||||||| ||||| ||||||||||| ||||| |||||| || Sbjct 138136 GGTACCATCTCTGGCCTCAATGTTCTGCGTATCATCAATGAACCAACTGCAGCTGCAATT 138195 Query 550520 GCATATGG 550527 |||||||| Sbjct 138196 GCATATGG 138203 Score = 93.3 bits (102), Expect = 3e-13 Identities = 101/133 (76%), Gaps = 1/133 (1%) Strand=Plus/Minus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || || || ||||| || || || |||||||| ||||||||||| || ||||||||| Sbjct 122305 GCTGTTATCACAGTACCTGCCTACTTCAATGACTCTCAACGTCAAGCGACAAAAGATGCT 122246 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 ||| ||| |||| || ||||| | | || || ||||| |||||||| || || | Sbjct 122245 GGAACTATCTCTGGTCTAAATGTGTTGAGAATCATTAATGAGCCTACTGCAGCAGCTATC 122186 Query 550520 GCATATGGACTTG 550532 || ||||| |||| Sbjct 122185 GCTTATGG-CTTG 122174 Score = 89.7 bits (98), Expect = 4e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||| | || ||||| || ||||||||||| | || |||||||||||||| Sbjct 122974 GGTATCGATCTTGGGACCACCTACTCCTGTGTTGGTGTGTTCCAGCATGGTAAAGTTGAA 122915 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| || ||||| || || || ||||| | ||||| || | | Sbjct 122914 ATCATTGCCAATGATCAGGGCAACAGGACCACACCCAGCTATGTGGCCTTCACAGATAGT 122855 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCA 550149 || | |||| |||||||| || |||| Sbjct 122854 GAGAGGCTGATTGGAGATGCAGCCAAGAATCA 122823 >seq2193 Length=95501 Score = 95.1 bits (104), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || | || || || || || || |||||||| || || || || || ||||||| Sbjct 16282 ATGCTGTCGTGACCGTGCCTGCCTACTTCAATGACTCTCAGCGCCAGGCCACCAAAGATG 16341 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | || ||| |||| |||||||| |||||||| ||||| || || ||||||||||| Sbjct 16342 CAGGGACAATTTCTGGCCTTAATGTCCTTCGTATCATCAACGAGCCGACTGCTGCTGCTA 16401 Query 550518 TTGCATATGGACTTGATAAA 550537 |||| || || || || ||| Sbjct 16402 TTGCTTACGGCCTGGACAAA 16421 >seq365 Length=500478 Score = 87.8 bits (96), Expect = 1e-11 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 563272 TGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGT 563331 || ||||| |||||| || ||||| |||| || || | |||||| || || Sbjct 4118 TGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGC 4177 Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 ||||| || || || | || ||||| ||||||||||| ||||| || || || || || Sbjct 4178 TTTCCAGCGAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTG 4237 Query 563392 TGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTA 563451 ||| || |||||| || ||| || | | ||||| || | ||||||||||| Sbjct 4238 GCTTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTG 4297 Query 563452 AGAGTTTTAACGAAAATTTGCAT 563474 || || || ||||| || ||||| Sbjct 4298 AGTGTCTTGACGAAGATCTGCAT 4320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4027687570512860