Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1673 105 5e-18 seq365 104 2e-17 SEQ16359 100 2e-16 seq510 84.2 2e-11 >seq1673 Length=142529 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 101240 TTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCG 101299 |||||||| | | ||| | || | || ||||| || || || || || ||||| || Sbjct 269 TTTCCTCCACGGAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 210 Query 101300 GCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGC 101359 | | || | | |||| |||| |||||||| ||||| |||| | ||| || || || Sbjct 209 GACAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGA 150 Query 101360 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCC 101419 || ||||||||||| ||||| || ||| ||| ||| | || | ||||| | ||| Sbjct 149 GGGATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTCTCAATGGTGTCGCTGGGCTCC 90 Query 101420 ACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || || |||| || ||||| || | || || ||||| ||||||||| Sbjct 89 ACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATG 39 >seq365 Length=500478 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| ||||||||||| || ||||| || | || || | | |||| |||| ||| Sbjct 4118 TGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGC 4177 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || ||||| | ||| || || || ||||||||||| || || || || || Sbjct 4178 TTTCCAGCGAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTG 4237 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | |||||| | || || || || |||| ||||| || || Sbjct 4238 GCTTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTG 4297 Query 101447 AAAGTTTTTACAAATATCTGCATGGTT 101473 | || || || || ||||||||| || Sbjct 4298 AGTGTCTTGACGAAGATCTGCATGTTT 4324 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| ||||| || || || ||||| || | || || | | | || |||| ||| Sbjct 8956 TGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCCAGCTGC 9015 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || ||||| | ||| ||||| || |||||||||||||| || || || || Sbjct 9016 TTGCCAGCGAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCCTGGATCTTA 9075 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| || | || | |||||| | || || || || |||| ||||| || || Sbjct 9076 GCTTTCACGTTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTTTTACCAGTG 9135 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | || || || || ||||||||| Sbjct 9136 AGTGTCTTGACGAAGATCTGCATG 9159 Score = 93.3 bits (102), Expect = 3e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 101313 CATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTT 101372 |||| |||| ||||| || || || ||||| | ||| || || || ||||||||||||| Sbjct 9656 CATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCTT 9715 Query 101373 TATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGA 101432 | || || ||||| || ||| | || | |||||| | ||||| || || |||| Sbjct 9716 TGTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCTAGGGTGA 9775 Query 101433 CCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTT 101473 || ||||| || | ||||| ||||| ||||||||| || Sbjct 9776 TGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCATGTTT 9816 >SEQ16359 Length=2539 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| |||| || || | |||| || | ||| Sbjct 2519 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTCTAGCTGC 2460 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| |||| ||| || || || || || ||||||||||| || || || ||| Sbjct 2459 TTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGGATCTTT 2400 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | ||||| | ||||| || || |||| ||||| || || Sbjct 2399 GCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTACCAGTC 2340 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| |||||||| Sbjct 2339 AGGGTCTTCACAAAGATCTGCAT 2317 >seq510 Length=807390 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 101324 TGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATT 101383 |||||||| ||||| |||| ||| || || || || || ||||||||||| || || || Sbjct 1578 TGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGGATC 1637 Query 101384 TTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCG 101443 ||| ||| ||| | || | ||||| | ||||| || || |||| ||||| || Sbjct 1638 TTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTACCA 1697 Query 101444 GTTAAAGTTTTTACAAATATCTGCAT 101469 || | || || ||||| |||||||| Sbjct 1698 GTCAGGGTCTTCACAAAGATCTGCAT 1723 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 101324 TGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATT 101383 |||||||| ||||| |||| ||| || || || || || ||||||||||| || || || Sbjct 4238 TGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGGATC 4297 Query 101384 TTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCG 101443 ||| ||| ||| | || | ||||| | ||||| || || |||| ||||| || Sbjct 4298 TTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTACCA 4357 Query 101444 GTTAAAGTTTTTACAAATATCTGCAT 101469 || | || || ||||| |||||||| Sbjct 4358 GTCAGGGTCTTCACAAAGATCTGCAT 4383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396131511237798