Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value SEQ16359 91.5 1e-13 seq1673 82.4 6e-11 >SEQ16359 Length=2539 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 48546 CTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTT 48605 || || |||| ||||| || || ||| ||| || || || ||||| || || || | Sbjct 2537 CTCAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 2478 Query 48606 CGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCC 48665 ||| | || || | ||||||||| ||||| ||||| || || || || | || | ||| Sbjct 2477 CGACCATCTTCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCT 2418 Query 48666 TCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACC 48725 || ||||| |||||| ||| ||| | | | || | ||||||||||| Sbjct 2417 TCTTTGTCCTGGATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGG 2358 Query 48726 GTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || || ||||| || |||| || || ||||| ||||||||| || Sbjct 2357 GTGATTGTTTTACCAGTCAGGGTCTTCACAAAGATCTGCATCTTG 2313 >seq1673 Length=142529 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||||| || || ||| ||| || || || ||||| ||||| || | || Sbjct 257 AGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGG 198 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| ||||||||| ||||| ||||| | ||| || || | || | ||| || Sbjct 197 CCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCT 138 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| ||| ||| | | | || | ||||||||||| || Sbjct 137 TTGTCTTGGATCTTTGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTG 78 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || ||||| |||||||| Sbjct 77 ATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 40 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380796397621722