Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq365 102 5e-16 seq484 98.7 6e-15 seq327 95.1 8e-14 >seq365 Length=500478 Score = 102 bits (112), Expect = 5e-16 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| || || | | |||||| || ||||||||||| || || | | || Sbjct 4142 TTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCGAAGATCAACCTCTGC 4201 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || ||||||||||| ||||||||||| || ||||| ||| ||| ||||| || ||| Sbjct 4202 TGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCA 4261 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || | | || ||||| || |||||||| ||||| ||||| ||||| || || Sbjct 4262 CTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTGAGTGTCTTGACGAAGATCTG 4317 >seq484 Length=430722 Score = 98.7 bits (108), Expect = 6e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT 476092 ||||| || ||| | || || |||||||| | || || | ||| | || ||| Sbjct 384110 GAAGGAGAGAGAGCCATGACCAAGGATAATAATATCCTGGGGAAGTTTGAACTCACTGGT 384051 Query 476093 ATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAAT 476152 ||||| ||||||||||||||||| ||||| ||||| || || |||||||||||||| || Sbjct 384050 ATTCCACCTGCTCCCAGAGGAGTCCCTCAGATTGAGGTGACCTTTGATATTGATGCCAAC 383991 Query 476153 GGTATTCTTAATGT 476166 |||||||| || || Sbjct 383990 GGTATTCTCAACGT 383977 >seq327 Length=760595 Score = 95.1 bits (104), Expect = 8e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 || || || || || || || || || ||||| |||||||||||||| || |||||||| Sbjct 122305 GCTGTTATCACAGTACCTGCCTACTTCAATGACTCTCAACGTCAAGCGACAAAAGATGCT 122246 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 |||| || | ||||| ||||| || | || |||||||| || || ||||| || | Sbjct 122245 GGAACTATCTCTGGTCTAAATGTGTTGAGAATCATTAATGAGCCTACTGCAGCAGCTATC 122186 Query 474857 GCTTATGGTCTTGATAAGAA 474876 |||||||| | || ||||| Sbjct 122185 GCTTATGGCTTGGACAAGAA 122166 Score = 86.0 bits (94), Expect = 4e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 || ||||| || || || || || || ||||| || || || || || || || ||||| Sbjct 138076 GCTGTAATCACAGTACCTGCCTACTTCAATGACTCCCAGCGCCAGGCCACAAAGGATGCT 138135 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 || | || | || || |||||| | ||||| || ||||||||||| ||||| ||| || Sbjct 138136 GGTACCATCTCTGGCCTCAATGTTCTGCGTATCATCAATGAACCAACTGCAGCTGCAATT 138195 Query 474857 GCTTATGGTCTTGATAAGAA 474876 || ||||| | || ||||| Sbjct 138196 GCATATGGGTTGGACAAGAA 138215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3266874595971272