Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq49 185 1e-41 seq4 86.0 7e-12 >seq49 Length=1117640 Score = 185 bits (204), Expect = 1e-41 Identities = 967/1510 (64%), Gaps = 80/1510 (5%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||| | ||| | | || |||||| | || || ||| | | Sbjct 731002 CCGCAGCACATGCTCATGAGAGTCTCTGTAGGAATCCACAAGACGGATATCGATGCAGCG 731061 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || | |||| | | || ||||| ||||| | || || ||||| Sbjct 731062 ATTGAGACCTACAACCTGCTGTCAGAGAAGTG-GTTCACCCACGCCTCCCCGACTCTCTT 731120 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| ||||| || || || ||| ||||||| |||||||| |||||| ||||| || Sbjct 731121 CAACGCTGGGACCAACAGGCCTCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGACGA 731180 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | || ||||| | || || | | ||||||| | ||||| |||| ||||| Sbjct 731181 CAGCATTGAAGGCATCTACGACACGCTGAAGCAGTGTGCCCTCATCTCCAAGTCAGCTGG 731240 Query 75451 GGGTATTGGGATG-----CACATCCAT--GATGT---GAGAGCCAATAAATCTCGTATTC 75500 || || || || || | ||| ||| | | |||| || ||||| Sbjct 731241 AGGCATCGGTGTGGCGGTCAGCTGCATCAGATCTACAGGGAGC---TACATCTCT----- 731292 Query 75501 GGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAG 75560 || || || || | || | || | | || ||||| | || | ||| ||| | Sbjct 731293 --GGCACCAACGGAAACTCCAACGGGCTCGTCCCCATGCTGAGAGTTTACAACAACACGG 731350 Query 75561 CGCGCTATGTAAATCAAGCGGGGCGTCGCAAG----GGGTCCATCGCGGTCTACTTGGAA 75616 | ||||| || | || | ||||| | || || || |||| | ||| | || Sbjct 731351 CACGCTACGTCGACCAGG-GGGGCAACAAGAGACCCGGAGCCTTCGCCATGTACCTAGAG 731409 Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGAAGA 75675 || ||||| || | | || ||||| ||| | | || ||| ||| | || || Sbjct 731410 CCCTGGCACTTTGACGTGTTCGACTTCCTGGAGCTGAAGAAG-AACACAGGAAAGGAGGA 731468 Query 75676 GGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGT 75735 | || ||||| || || | || ||||||| || || || ||||||||| | || Sbjct 731469 GCAGAGGGCCAGAGACCTTTTCTACGCCATGTGGATCCCTGATCTGTTCATGAAGAGAGT 731528 Query 75736 TGAGG--AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCA---CCAGGTCTCTCC 75790 ||| | || | |||||||| | ||||| ||| || || ||||| Sbjct 731529 GGAGAGCAACCAGGAC--TGGTCTCTGATGTGTCC---CAACGCCTGCCCTGGTCTGGAT 731583 Query 75791 GAC-GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC 75849 || || | ||| ||||||||||| |||||||| | |||||| ||||||| | || Sbjct 731584 GAGTGCTGGGGG-GAGGAGTTTGAGAAGCTCTACACCAGGTATGAGAAGGAGGGCAAGGC 731642 Query 75850 CAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGA 75908 ||| ||| || || | | | | | ||| | || || | | || ||||| |||| Sbjct 731643 CAA-GCGTGTGGTGAAGGCTCAGCAGCTGTGGTACGCCATCATTGAGTCGCAGACAGAGA 731701 Query 75909 CTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATT 75968 ||||||| ||||| ||||| ||||| || || || |||| |||||| ||||| ||||| Sbjct 731702 CTGGAACGCCATACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAATC 731761 Query 75969 TGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATG 76028 |||| || || ||| || || || ||||| |||||| | || ||||| ||||| | Sbjct 731762 TGGGCACCATAAAGTGCAGCAACCTGTGCACCGAAATTGTTGAATACACCAGCAAGGACG 731821 Query 76029 AGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTC 76088 || || || || || |||| || |||||||| | ||| |||| |||| | Sbjct 731822 AGGTAGCGGTCTGTAACCTGGCCTCCATCGCCCTCAACATGTACGTCACCCCAGAG---C 731878 Query 76089 GCACTTTTGATTATGAAAAACT-TCATGAAATCA-CAAAG--ATTGTTACCAAAAATCTA 76144 | |||||||||| | | ||||| ||| | | | ||||| || || |||||| || Sbjct 731879 GGACTTTTGATTTTAAGAAACTGGCAT-ATGTGACCAAAGTAATCGT---CAAAAACCTG 731934 Query 76145 AACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGA-AAGTCTAATATGCG 76203 ||| | || || | || | || || || | || ||| || || || | ||| Sbjct 731935 AACAAGATTATCGAGATCAACTACTACCCGGTACCGGAAGC-CGAGAACTCGAACAAGCG 731993 Query 76204 ACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTA 76263 ||||| || || || | || || || ||| | || || | || ||| | || | Sbjct 731994 CCACAGGCCGATCGGAATCGGAGTCCAGGGTTTAGCCGACGCCTTCATTCTCATGCGTCA 732053 Query 76264 CGCATTTGATTCAGATGAAGCCAAGGAGATGAA-TGCT-------CGTATCTTTGAAACC 76315 | | ||||| ||||| || | | || |||| | ||||| |||||| Sbjct 732054 CCCGTTTGA--------AAGCCCAGAGGCTCAACTGCTCAACATCCACATCTTCGAAACC 732105 Query 76316 ATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAG 76375 || || |||| | ||||||||||| || || |||| | | | || |||| ||| Sbjct 732106 ATTTACTACGCCGCTCTGGAGGCGAGCTGCGAGCTGGCGGCCGAGCTCGGCCCCTACGAG 732165 Query 76376 ACATTTGAGGGTTCTCCCGCGTC-CCAAGGG-GTGCTTCAGTTTGATATGTGGGAAGGTG 76433 || | ||||| ||||| ||| |||||| | || |||| || ||||||| || | Sbjct 732166 ACGTACGAGGG--CTCCCCGGTCAGCAAGGGCATCCTGCAGTACGACATGTGGG-AGAAG 732222 Query 76434 AAACCAA--GCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCT 76491 | || | | || || |||||| | | || ||||| ||| | | || | Sbjct 732223 ACGCCGACCGATC-TCTGGGACTGGAAGCTGCTGAAGGAGAAAATCGCCAAACATGGCGT 732281 Query 76492 TCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAA 76551 | ||||| || || |||| || ||||| |||||||||||||| || ||| |||| || Sbjct 732282 GAGGAACAGCCTGCTGCTGGCCCCGATGCCCACAGCCTCCACCGCCCAGATCCTGGGCAA 732341 Query 76552 TAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGA 76611 || || | | | ||| | ||||| | ||||||||| | || || | || || Sbjct 732342 CAACGAGTCCATCGAAGCCTACACCAGCAACATCTACACCCGCAGGGTTCTGTCGGGAGA 732401 Query 76612 GTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAA 76671 |||| || |||||| || || |||| ||||| | | ||| || || ||| | | Sbjct 732402 GTTTCAGATCGTCAACCCTCATCTGCTCAAAGACCTGACGGAGAGAGGACTGTGGAACGA 732461 Query 76672 GGATATGAAG 76681 ||| |||||| Sbjct 732462 GGAGATGAAG 732471 >seq4 Length=2013838 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/135 (76%), Gaps = 4/135 (3%) Strand=Plus/Plus Query 65077 GAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GC 65135 ||||| || | || ||||| ||||||||| ||||||||||| || ||||| ||| || Sbjct 553547 GAGCGAATTGTGGCTTTTGCAGCTGTGGAGGGCATCTTCTTCTCTGGCTCATT-TGCTGC 553605 Query 65136 TATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTT-CTCAAATGAACTTA 65194 || |||||||| |||||| | || | ||||| || || | ||| ||| |||||||| | Sbjct 553606 CATCTATTGGTTAAAGAAGAGAGGCTTGATGCCTGGTCT-TACTTACTCCAATGAACTGA 553664 Query 65195 TTTCCCGAGATGAGG 65209 || | | ||||||| Sbjct 553665 TTAGCAGGGATGAGG 553679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596342799152320