Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq327 140 4e-27 seq49 132 6e-25 seq7405 125 9e-23 seq3602 111 2e-18 seq354 111 2e-18 seq3022 107 2e-17 seq194 104 3e-16 seq6510 102 1e-15 seq95 91.5 2e-12 seq56 86.0 8e-11 >seq327 Length=760595 Score = 140 bits (154), Expect = 4e-27 Identities = 152/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| || |||||||||||||| || | | | || Sbjct 116398 GCTTGGCCAGCTCCCCGGGCAGCAGCAGCCGGACGGCGGTCTGGATTTCCCTGGAGGTGA 116457 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| | |||||| |||| ||||| ||| |||||| | ||||||| |||| | Sbjct 116458 TGGTGGACCTCTTGTTGTAGTGAGCCAGGCGGGAGGCCTCACCGGCGATGCGCTCGAAGA 116517 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||| ||||||| ||| | ||| |||||||||| || |||| Sbjct 116518 TGTCGTTGACGAACGAATTCATGATGCCCATGGCTTTGGAGGAGATGCCCGTATCTGGGT 116577 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 116578 GCACCTGCTTCAGCACCTTGTA 116599 >seq49 Length=1117640 Score = 132 bits (146), Expect = 6e-25 Identities = 161/217 (74%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||||||||| ||||||| ||| | || | |||||||| ||||| |||||||| Sbjct 731367 CTGGTCGACGTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGTTGGA 731308 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGC----GCACCTTGTGCGCGGCAA 1630180 | ||||||||||| | | |||| || | | | ||| || | || || Sbjct 731307 GTTTCCGTTGGTGCCAGAGATGTAGCTCCCTGTAGATCTGATGCAGCT---GACCGCCAC 731251 Query 1630181 AGCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGC 1630240 | |||||||| || || |||||||||||||| || ||||| || |||||||||||||||| Sbjct 731250 A-CCGATGCCTCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCGTAGATGC 731192 Query 1630241 CCTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCA 1630277 | || || |||| |||||||| | | || ||||| Sbjct 731191 CTTCAATGCTGTCGTCCTTCATGGCGAGCAGGAAGCA 731155 Score = 93.3 bits (102), Expect = 5e-13 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 1627295 TCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGGCGGTTGACCACGGTAAAGTCGC 1627354 ||||||| || | | || ||||| |||| ||| || ||||||| | ||| || | Sbjct 732457 TCCACAGTCCTCTCTCCGTCAGGTCTTTGAGCAGATGAGGGTTGACGATCTGAAACTCTC 732398 Query 1627355 CCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCGCACGCCTCGGTGTTGC 1627414 |||| || || | ||| |||||||||||| ||||| | | ||| | |||| |||||| Sbjct 732397 CCGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGC 732338 Query 1627415 CCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCA 1627453 |||||||||| | || | ||| |||||||| | |||| Sbjct 732337 CCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCA 732299 Score = 86.0 bits (94), Expect = 8e-11 Identities = 267/419 (64%), Gaps = 6/419 (1%) Strand=Plus/Minus Query 1628167 ACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTC 1628226 || || ||||||||||||||| || | | || ||||| |||||||||||| | || Sbjct 731801 ACAATTTCGGTGCACAGGTTGCTGCACTTTATGGTGCCCAGATTCTGCTGGTTGCTCTTC 731742 Query 1628227 AGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACG 1628286 |||| |||||| |||| |||||||| |||| || ||||| |||||| | | | | Sbjct 731741 CTGTTGCAGGCGTCTTTGTACAGCATGTATGGCGTTCCAGTCTCTGTCTGCGACTCAATG 731682 Query 1628287 ATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNNNNNNNN 1628346 ||||| |||| | ||| | || ||| ||| | || ||||| Sbjct 731681 ATGGCGTACCACAGCTGCTGAGCCTTCACCACACGCTTGGCCTTGCCCTCCTTCTCATAC 731622 Query 1628347 NNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCC-GGGC--GCCTCG 1628403 ||||| || | || ||||||| | ||| || |||| || | | Sbjct 731621 CTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCATCCAGACCAGGGCAGGCGTTG 731562 Query 1628404 GACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCACAC 1628463 ||||| | || |||||||| | || || | | ||| || || ||| Sbjct 731561 ---GGACACATCAGAGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAACAGATCAGGG 731505 Query 1628464 GTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTG 1628523 |||||| ||||| || ||||| | |||| | ||||||||| || |||||| || Sbjct 731504 ATCCACATGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTC 731445 Query 1628524 AGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 1628582 || || || |||||| | ||| |||||| ||||| ||||| ||| ||||| || Sbjct 731444 AGCTCCAGGAAGTCGAACACGTCAAAGTGCCAGGGCTCTAGGTACATGGCGAAGGCTCC 731386 >seq7405 Length=12082 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| | ||||| ||||||||||| | | | || Sbjct 8254 GCTTGGCCAGCTCACCGGGCAGCAGCAGCCTGACGGCCGTCTGGATCTCCCTGGAGGTGA 8195 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| || || ||| ||||||| | |||| || |||| | Sbjct 8194 TGGTGGAGCGCTTGTTGTAGTGAGCAAGGCGGGAGGCCTCGCCGGCGATACGCTCGAAGA 8135 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||| |||| ||||||||||||| ||| | |||| |||||||| |||||| | Sbjct 8134 TGTCGCTGACGAACGAGTTCATGATGCCCATAGCCTTGGACGAGATGCCGGTGTCGGGAT 8075 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | || ||||| || |||||||| Sbjct 8074 GGACTTGCTTCAGTACCTTGTA 8053 >seq3602 Length=33884 Score = 111 bits (122), Expect = 2e-18 Identities = 126/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 1254375 ACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGG 1254434 || || ||||||||||| | | | ||| ||| ||||||||| || |||| | Sbjct 13542 ACTGCTGTCTGGATCTCCCTGGAGGTGATGGTGGAGCGCTTGTTGTGCTGAACCAGCTGA 13601 Query 1254435 CCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATC 1254494 ||||||| | |||| || |||| ||||||||||| ||||||||||||| ||| Sbjct 13602 GAGGCCTCGCCGGCGATCCGCTCGAAGATGTCGTTGACGAACGAGTTCATGATGTTCATG 13661 Query 1254495 GACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1254543 | |||| |||||||||| ||| ||||| |||||||| |||||||||| Sbjct 13662 GCCTTGGTGGAGATGCCGGTGTCTGGGTGGACCTGCTTCAGCACCTTGT 13710 >seq354 Length=503150 Score = 111 bits (122), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 5/206 (2%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| | ||||||||||||||||| | | | || Sbjct 24096 GCTTGGCCAGCTCACCGGGCAGCAGCAGCCTGACGGCGGTCTGGATCTCCCTGGAGGTGA 24037 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| |||| ||| |||||| | ||| || || | | Sbjct 24036 TGGTGGAGCGCTTGTTGTAGTGAACCAGGCGGGAGGCCTCACCGGCGAGCCGCTCAAAGA 23977 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||| |||| ||||||||||||| || ||| |||||||| ||| || | Sbjct 23976 TGTCGCTGACGAACGAGTTCATGATGCCCA-----TTGGACGAGATGCCGGTGTCAGGAT 23922 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| ||||||||||| ||| Sbjct 23921 GAACCTGCTTCAGCACCTTGTACATG 23896 >seq3022 Length=51774 Score = 107 bits (118), Expect = 2e-17 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| || ||| ||| | ||| | ||||| ||||||||||| | | | ||| ||| Sbjct 18130 GCCAGCTCACCGGGCAGCAGCAGCCTGACGGCCGTCTGGATCTCCCTGGAGGTGATGGTG 18189 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| |||| || |||||| ||||||| | |||| || |||| |||||| Sbjct 18190 GAGCGCTTGTTGTAGTGAGCAAGACGGGAGGCCTCGCCGGCGATACGCTCGAAGATGTCG 18249 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 |||| || |||||||| | ||| | || || ||||| ||||| || ||| Sbjct 18250 CTGACGAAGGAGTTCATAATGCCCATGGCTTTAGACGAAATGCCGGTATCGGGATGGACC 18309 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 18310 TGCTTCAGCACCTTGTA 18326 >seq194 Length=662014 Score = 104 bits (114), Expect = 3e-16 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| | ||| || ||||| | ||| | || || Sbjct 390684 GCTTGGCCAGCTCCCCGGGCAGCAGCAGCCTCACCGCCGTCTGCACCTCCCTGCTGGTGA 390625 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | || ||||| ||| ||||| ||| ||||||| |||| || Sbjct 390624 TGGTGGAGCGCTTGTTGTATTGAGCCAGCCGGGACGCCTCTGTGGCGATGCGCTCGAACA 390565 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||| || || |||||||||| ||| | || ||||||||||| ||| || | Sbjct 390564 GGTCGTTCACGAAGGAGTTCATGATGCTCATGGCTCTGCTGGAGATGCCCGTGTCCGGAT 390505 Query 1254523 GCACCTG 1254529 | ||||| Sbjct 390504 GAACCTG 390498 >seq6510 Length=10163 Score = 102 bits (112), Expect = 1e-15 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| | ||||| ||||||||||| | | | || Sbjct 9998 GCTTGGCCAGCTCACCGGGCAGCAGCAGCCTGACGGCCGTCTGGATCTCCCTGGAGGTGA 10057 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| ||||| ||| ||||||| | |||| || |||| | Sbjct 10058 TGGTCGAGCGCTTGTTGTAGTGAGCCAGGCGGGAGGCCTCGCCGGCGATACGCTCGAAGA 10117 Query 1254463 TGTCGTTGACAAACGAGTTCATGA 1254486 ||||| |||||||||||||||||| Sbjct 10118 TGTCGCTGACAAACGAGTTCATGA 10141 >seq95 Length=890424 Score = 91.5 bits (100), Expect = 2e-12 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||||||||| | |||||||| |||| | ||| | |||||| | ||||||||| Sbjct 248154 GCCGCCAACTATTTGGACATCAAAGGTCTGTTAGATGTCACCTGCAAGACAGTGGCCAAC 248213 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 |||||||| ||||| | || ||||||||| | ||||| || |||||||| Sbjct 248214 ATGATCAAAGGCAAAACCCCGGAGGAGATCAGGAAGACTTTCAACATCAA 248263 >seq56 Length=1093683 Score = 86.0 bits (94), Expect = 8e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 1628167 ACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTC 1628226 |||||||| |||||||||||| || | | || ||||| || ||||||||| | || Sbjct 335800 ACGATCTCTGTGCACAGGTTGCTAGATTTGATGGTGCCCAGATTTTGCTGGTTGCTCTTC 335859 Query 1628227 AGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACG 1628286 |||| ||||||||||| |||||||| || | ||||| || |||| | | ||| | Sbjct 335860 CTGTTGCAGGCGTCCTTGTACAGCATGTACGGTGTCCCGGTTTCTGTCTGTGACTCGATG 335919 Query 1628287 ATGGCCGACCAGATCTG 1628303 ||||| |||| | ||| Sbjct 335920 ATGGCGTACCACAGCTG 335936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6104643284731238