Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value SEQ16359 141 8e-29 seq1673 134 1e-26 seq510 118 1e-21 seq365 114 1e-20 >SEQ16359 Length=2539 Score = 141 bits (156), Expect = 8e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || |||||||| || || || || || || ||| Sbjct 2316 GATGCAGATCTTTGTGAAGACCCTGACTGGTAAAACAATCACCCTGGAGGTGGAGCCCAG 2375 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || ||| ||||||||| ||||||||||| || ||||| || || Sbjct 2376 CGACACCATCGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGCATCCCTCCTGACCA 2435 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||| |||||||||| || || ||||| || ||| | | | | || || || || Sbjct 2436 GCAACGTCTGATCTTTGCTGGTAAGCAGCTAGAAGATGGTCGCACCCTCTCCGACTACAA 2495 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| || ||||| || || || ||| ||||| |||| Sbjct 2496 CATCCAGAAGGAGTCCACCCTCCACCTGGTGCTGCG 2531 >seq1673 Length=142529 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || || || || || ||| | Sbjct 40 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 99 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||||||||||||||| || ||||| || || Sbjct 100 GACACCATTGAGAATGTGAAAGCAAAGATCCAAGACAAAGAAGGCATCCCTCCTGACCAG 159 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | |||| || || ||| Sbjct 160 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 219 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || ||| ||||| |||| | || ||||| Sbjct 220 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTGCGTCTCCGTGGAGG 266 >seq510 Length=807390 Score = 118 bits (130), Expect = 1e-21 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || |||||||| || || || || || || ||| Sbjct 1724 GATGCAGATCTTTGTGAAGACCCTGACTGGTAAAACAATCACCCTGGAGGTGGAGCCCAG 1665 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || ||| ||||||||| ||||||||||| || ||||| || || Sbjct 1664 CGACACCATCGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGCATCCCTCCTGACCA 1605 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCT 24852 |||||| |||||||||| || || ||||| Sbjct 1604 GCAACGTCTGATCTTTGCTGGTAAGCAGCT 1575 Score = 118 bits (130), Expect = 1e-21 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || |||||||| || || || || || || ||| Sbjct 4384 GATGCAGATCTTTGTGAAGACCCTGACTGGTAAAACAATCACCCTGGAGGTGGAGCCCAG 4325 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || ||| ||||||||| ||||||||||| || ||||| || || Sbjct 4324 CGACACCATCGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGCATCCCTCCTGACCA 4265 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCT 24852 |||||| |||||||||| || || ||||| Sbjct 4264 GCAACGTCTGATCTTTGCTGGTAAGCAGCT 4235 >seq365 Length=500478 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || |||||||| || || || || || || ||| Sbjct 9158 ATGCAGATCTTCGTCAAGACACTCACTGGTAAAACCATCACCCTGGAGGTTGAGCCCAGT 9099 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||| ||||||||||| || || || ||||| Sbjct 9098 GACACCATCGAGAACGTGAAAGCTAAGATCCAGGACAAAGAAGGCATTCCCCCAGATCAG 9039 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||| || || || ||||||||||| | | | | || || || ||| Sbjct 9038 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACCCTCTCTGACTACAAC 8979 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || |||||||| || || ||| | || |||| || | || ||| Sbjct 8978 ATCCAGAAGGAATCCACCCTCCACCTTGTCCTGCGTCTGAGGGGTGGC 8931 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || |||||||| || || ||||| || || ||| Sbjct 4320 ATGCAGATCTTCGTCAAGACACTCACTGGTAAAACCATCACCCTCGAGGTTGAGCCCAGT 4261 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||| ||||| ||||| || ||||| || || Sbjct 4260 GACACCATTGAGAATGTGAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 4201 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||| || || || |||||||| ||| | | | | || || || ||| Sbjct 4200 CAGAGGTTGATCTTCGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAAC 4141 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 || ||||| ||||| || || || Sbjct 4140 ATCCAAAAAGAATCCACCCTCCA 4118 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || ||||| || || || || || || || ||| Sbjct 4033 ATGCAGATCTTTGTCAAGACACTCACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 3974 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 3973 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAG 3914 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||| || || |||||||| ||| | | | | || || || ||| Sbjct 3913 CAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAAC 3854 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || |||||||| || || ||| | ||| |||| Sbjct 3853 ATCCAGAAGGAATCCACCCTCCACCTTGTGCTGCG 3819 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || || || || || || || || || || ||| Sbjct 9812 ATGCAGATCTTTGTGAAAACCCTTACTGGCAAGACCATCACCCTAGAGGTGGAGCCCAGT 9753 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || ||||| ||||||||||| || || || || || Sbjct 9752 GACACCATTGAGAATGTCAAGGCTAAAATCCAGGACAAAGAAGGCATTCCCCCAGACCAG 9693 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 || | |||||||| || || || |||||||| ||| Sbjct 9692 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAAGAT 9657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449726560179920