Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2408 134 1e-26 seq1673 82.4 6e-11 >seq2408 Length=85673 Score = 134 bits (148), Expect = 1e-26 Identities = 133/172 (77%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || ||||| || ||||||||||| || | ||||| |||||| || | |||||| |||||| Sbjct 53704 AGATCAGTTTCAGGGTTGTCACACTCGGTACACAGCACAAATTTTCTGATGAACCCATCA 53645 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| |||||| | ||| | |||||||| |||||||||||| | || ||||||||| Sbjct 53644 AGCATGTCCTGCAGCTTGTTCGCCTCGTGGGATCCGTTGACGATGTAACGATCGTTTTTG 53585 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 ||| | ||| || || ||||| || || || || || |||| ||||||| Sbjct 53584 GTATCAAACTGGGTCTGAGCGCCGAGTTCACAACCAAAAAACTTGGTCGGGT 53533 >seq1673 Length=142529 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| || || | || ||||| ||||| ||| | || |||||| | Sbjct 40 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 99 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | || ||| ||||| |||||||||||| | || || || Sbjct 100 GACACCATTGAGAATGTGAAAGCAAAGATCCAAGACAAAGAAGGCATCCCTCCTGACCAG 159 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || || | ||| ||||| |||||||| |||| | | || || | || |||||| Sbjct 160 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 219 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502 || || || || || || | ||| ||||| | | || || || ||||| Sbjct 220 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTGCGTCTCCGTGGAGGAAA 269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412688571746102