Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1673 145 5e-30 seq365 140 2e-28 SEQ16359 131 1e-25 >seq1673 Length=142529 Score = 145 bits (160), Expect = 5e-30 Identities = 173/233 (74%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 |||||||| | | | ||| |||||||| | |||| ||||||||| ||||| ||||| Sbjct 269 TTTCCTCCACGGAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 210 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || ||| |||| |||| ||||| ||||| || || |||||||| | |||||||| | Sbjct 209 GACAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGA 150 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCT 34925 || | || || ||||| | || ||| ||| || || || || | || ||| || Sbjct 149 GGGATGCCTTCTTTGTCTTGGATCTTTGCTTTCAC--ATTCTCAATGGTGTCGCTGGGCT 92 Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || || | ||| |||||||| || ||||||||||| ||||||||||||||| Sbjct 91 CCACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATG 39 >seq365 Length=500478 Score = 140 bits (154), Expect = 2e-28 Identities = 178/243 (73%), Gaps = 9/243 (4%) Strand=Plus/Plus Query 34743 AATCATTT-----CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAAT 34797 |||||||| || ||||||| | ||| || ||||| | |||| |||||||| || Sbjct 3794 AATCATTTATTGACCACCCCTCAGACGCAGCACAAGGTGGAGGGTGGATTCCTTCTGGAT 3853 Query 34798 GTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTG 34857 ||| ||||| || ||| |||| |||| ||||| ||||| || || ||||||| | || Sbjct 3854 GTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTG 3913 Query 34858 CTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGAT 34915 |||||| | || | ||||||||||| | || || ||||| || || || | Sbjct 3914 CTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGAC--ATTCTCGATGGTG 3971 Query 34916 TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGC 34975 ||| ||| ||| || || | ||| |||||||| || ||||| ||||| |||||||||||| Sbjct 3972 TCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTGAGTGTCTTGACAAAGATCTGC 4031 Query 34976 ATG 34978 ||| Sbjct 4032 ATG 4034 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | |||||| ||||| | |||| |||||||| ||||| ||||| || Sbjct 8932 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 8991 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| | || ||||| ||||| || |||||||||| | ||||| ||| | || Sbjct 8992 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCTGGGGGA 9051 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || || ||||| | || || ||| ||| | || | ||| ||| ||| || Sbjct 9052 ATGCCTTCTTTGTCCTGGATCTTAGCTTTCACGTTCTCGATGGTGTCACTGGGCTCAACC 9111 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| ||||| || || ||||| ||||| || |||||||||||| Sbjct 9112 TCCAGGGTGATGGTTTTACCAGTGAGTGTCTTGACGAAGATCTGCATG 9159 Score = 111 bits (122), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || || ||||| ||||| || ||| |||| |||| ||||| |||||||| |||||| Sbjct 4130 TCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCGAAG 4189 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| | |||||||| | || | || |||||||| | || || ||| || || Sbjct 4190 ATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTCAC--AT 4247 Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 || || | ||| ||| ||| || || | ||| ||||| || || ||||| ||||| | Sbjct 4248 TCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTGAGTGTCTTGA 4307 Query 34965 CAAAGATCTGCATG 34978 | |||||||||||| Sbjct 4308 CGAAGATCTGCATG 4321 Score = 96.9 bits (106), Expect = 2e-15 Identities = 124/169 (73%), Gaps = 4/169 (2%) Strand=Plus/Plus Query 34812 GGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCA 34871 || |||| |||| ||||| ||||| || |||||||||| | ||||||||| | || | Sbjct 9647 GGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAA 9706 Query 34872 CCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGAC 34929 || || ||||| | ||||| ||||| || || || | ||| ||| ||| || Sbjct 9707 TGCCTTCTTTGTCCTGGATTTTAGCCTTGAC--ATTCTCAATGGTGTCACTGGGCTCCAC 9764 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| |||||||| || || ||||| || ||||||||||||||| Sbjct 9765 CTCTAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCATG 9813 Score = 87.8 bits (96), Expect = 1e-12 Identities = 104/139 (75%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 34842 CGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGA 34901 ||||||||| | ||||||||| | || | ||||||||||| | |||||| |||| Sbjct 8795 CGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATTTTTGCCTTGA 8854 Query 34902 CGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGT 34959 | || || || | ||| ||| ||| || || | || |||||||| || |||||||| Sbjct 8855 C--ATTCTCAATGGTGTCACTGGGCTCAACCTCCAGAGTGATGGTCTTGCCAGTGAGGGT 8912 Query 34960 CTTTACAAAGATCTGCATG 34978 ||| || |||||||||||| Sbjct 8913 CTTGACGAAGATCTGCATG 8931 >SEQ16359 Length=2539 Score = 131 bits (144), Expect = 1e-25 Identities = 164/223 (74%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 34757 CTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTG 34816 |||| | ||| |||||||| | |||| ||||||||| ||||| ||||| || ||| || Sbjct 2537 CTCAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 2478 Query 34817 CGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCC 34876 || |||| || || ||||| || || |||||||| ||||||||||| | || | || Sbjct 2477 CGACCATCTTCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCT 2418 Query 34877 TCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAA 34934 || ||||| | || ||| ||| || || || || | || ||| ||| || || | Sbjct 2417 TCTTTGTCCTGGATCTTTGCTTTCAC--ATTCTCGATGGTGTCGCTGGGCTCCACCTCCA 2360 Query 34935 CGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || || || || |||||||| |||||||||||||| Sbjct 2359 GGGTGATTGTTTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 2317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325572075246266