Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value SEQ16359 116 3e-21 seq1673 114 1e-20 seq365 96.9 3e-15 >SEQ16359 Length=2539 Score = 116 bits (128), Expect = 3e-21 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 29566 CTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTG 29625 |||| ||||||||||| || || ||||| || || || ||||| || || | | |||| Sbjct 2537 CTCAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 2478 Query 29626 CGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCC 29685 ||| ||| || || || || |||||| | |||| | |||||| || || || || || Sbjct 2477 CGACCATCTTCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCT 2418 Query 29686 TCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGA 29745 |||||||| || | ||| ||| ||| | || | ||||| | || || || || Sbjct 2417 TCTTTGTCCTGGATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGG 2358 Query 29746 GTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || ||||| ||||| | ||| || ||||| |||||||| || Sbjct 2357 GTGATTGTTTTACCAGTCAGGGTCTTCACAAAGATCTGCATCTT 2314 >seq1673 Length=142529 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | | ||||||||||| || || ||||| || || || ||||| || || | Sbjct 267 TCCTCCACGGAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 208 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | |||||| ||| || || || || |||||| | |||| || ||||| || || || Sbjct 207 CAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGAGG 148 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || ||||||||||| | ||| ||| ||| | || | ||||| | || || Sbjct 147 GATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCAC 88 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || |||||||| | ||| || ||||| |||||||| Sbjct 87 CTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 40 >seq365 Length=500478 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 || || |||||||||||||| ||||| || || | | |||||| ||| || || || Sbjct 4118 TGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGC 4177 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || ||||| | ||||| || ||||| || || ||||| || || ||||| || | || Sbjct 4178 TTTCCAGCGAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTG 4237 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 ||| ||| | || | |||||| | || || || || || || ||||| ||||| Sbjct 4238 GCTTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTG 4297 Query 29764 AAGGTTTTAACAAATATCTGCATTTT 29789 | || || || || |||||||| || Sbjct 4298 AGTGTCTTGACGAAGATCTGCATGTT 4323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385076410558374