Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq637 116 3e-20 seq484 104 2e-16 seq2193 93.3 3e-13 seq327 93.3 3e-13 >seq637 Length=384066 Score = 116 bits (128), Expect = 3e-20 Identities = 917/1475 (62%), Gaps = 14/1475 (1%) Strand=Plus/Minus Query 281416 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 281475 ||| || |||||| || || || || || ||||| || | || || || || || | Sbjct 304711 TTTGTCGACGGCAGATACGTTTAGGATGCCGTTGGCGTCAATGTCGAAAGTCACCTCCAC 304652 Query 281476 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 281535 || || || ||||| |||| || ||||| ||| | | ||| ||||||| || Sbjct 304651 CTGCGGTACACCTCTGGGAGCGGGAGGGATACCTGTGAGCTCAAACTTTCCCAGGAGGTT 304592 Query 281536 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 281595 || ||||| || | || || || || | | ||||| ||| | | || || Sbjct 304591 GTTGTCTTTGGTCATGGCTCTCTCGCCTTCATACACCTGGATCAGAACACCTGGCTGGTT 304532 Query 281596 ATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAA 281654 ||||| || || | || | ||||| | | || || ||||| ||||||| | | Sbjct 304531 GTCTGAGTAGGTGGAGAAGA-TCTGGGTCTGCTTGGTGGGGATTGTGGTGTTTCGCTTGA 304473 Query 281655 TAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 281714 | | | ||||||| ||||| || ||||| | || ||||| || |||| || || | Sbjct 304472 TCAGAGACGTCATAACTCCACCTGCAGTTTCGATGCCCAGAGACAGTGGAGCCACGTCCA 304413 Query 281715 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 281774 || | | || || | || || || | || | || ||||| || || | | Sbjct 304412 GCAGCAGCAGATCCTGGACGTTCTCTGAGGTGTCGCCCATGAGGATAGCAGCCTGGACTG 304353 Query 281775 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 281834 | ||||| || || || |||||||| || || | | | || || | | | ||||||| Sbjct 304352 CTGCACCGTAGGCCACGGCTTCATCTGGGTTGATGCTCTTGTTCAGGTCTCTGCCATTGA 304293 Query 281835 AAAAATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACA 281893 |||| | || |||| || | | || || || | | || || ||||| | || Sbjct 304292 AAAAGTCCTGTAAGAGCTTCTGG-ATTTTGGGGATTCTTGTGGAGCCACCAACCAGGACG 304234 Query 281894 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 281953 ||||| || | || || || ||||| || | || | | || ||||| || || Sbjct 304233 ATTTCGTGGATCTTGGACTTGTCCAGCTTGGCGTCTTGCAGGGCCTTCTCAACCGGCTCC 304174 Query 281954 AGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACA 282013 || | ||||| | || | || || || ||| || || || | | | Sbjct 304173 AGTGTTCCCCTAAAGAGCTCCAAGTTGAGCTCCTCAAATCGTGCCCTGGTGATGGAGGTG 304114 Query 282014 TTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 282073 | | | |||||||| || |||| ||| || | || || | | || || ||||| Sbjct 304113 TAAAAGTCAATTCCCTCAAACAGAGAGTCGATCTCGATGTTTGCCTGGGTGCTGGAAGAC 304054 Query 282074 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT-- 282131 | || | || || | ||||| ||||| | ||||| | | ||| | || ||| Sbjct 304053 AATGTTCTCTTCGCTCTCTCACAGGCTGTGCGCAGTCTCCTCACTGCTCT--CTTATTCT 303996 Query 282132 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGAT 282191 | | | || | || | ||||||||| || ||||| || | | || | || | Sbjct 303995 GGCTGATGTCCTTCTTGTGTTTTCTCTTAAATTCTTCTACGAAGTGGTTGACCATTCGGT 303936 Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251 | ||||| || || || || | | || | ||| | || ||| | || | || | | Sbjct 303935 TGTCAAAGTCCTCCCCGCCAAGATGTGTGTCTCCAGCTGTGGCTTTCACCTCAAAGATGC 303876 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 |||| || | | || | | || ||| || |||||||| | |||||| || || | Sbjct 303875 CATCCTCGATGGTCAGGATGGACACGTCAAATGTGCCACCACCGAGATCAAAGATGAGCA 303816 Query 282312 CATTCATTTCTTTGTCTTGGTT---TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368 | || ||| |||| || |||||| ||||| || || | || || || || | Sbjct 303815 CGTTGCGCTCTCC-TCTT--TTACCTTTATCCAGACCGTAAGCGATGGCCGCTGCTGTGG 303759 Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428 | ||||| || || ||||||||||| || |||| || || ||||| |||||||||| Sbjct 303758 GCTCATTGATGATCCTCAAAACATTTAGTCCAGAGATCACACCGGCATCCTTAGTGGCTT 303699 Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTC 282488 ||||||| || || || ||||| || || || || || || || | | || | || Sbjct 303698 GTCTTTGGGAGTCATTGAAATAAGCCGGCACTGTGATGACTGCGTTCGACACCCTCTGTC 303639 Query 282489 CAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 282548 | | || || || | | ||||| || | | ||| || || || | ||| | Sbjct 303638 CCAGGTAGGCCTCAGCGATCTCCTTCATCTTCACCAGGACCATGGAGGAGATCTCTTCAG 303579 Query 282549 GAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACAT 282608 || | | ||||| || || ||| || | | | || || | Sbjct 303578 GATAGAACGCCTTGGTCTCCCCTTTATACTCCACCTGGACTTTGGGCTTTCCGTTGTCGC 303519 Query 282609 TAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTC 282668 | || || || || ||||| ||||| || || || ||| ||| ||||| | || Sbjct 303518 TGATCACCTTGAAAGGCCAGAGCTTCATGTCGGACTGGACAACCGAGTCGTTAAACTTTC 303459 Query 282669 TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATT 282728 | || || | ||||| |||||||| | || ||||| ||||| | || |||| | | Sbjct 303458 TTCCGATGAGCCGTTTGGCATCAAAGACTGTGTTGGTGGGATTCATGGCGACTTGGTTCT 303399 Query 282729 TGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGC 282788 |||| || |||||||| || | ||||| || || || | ||||| |||||||| | Sbjct 303398 TGGCAGCGTCTCCAATGAGCCGCTCTGTGTCGGTGAAGGCCACATAGCTGGGAGTTGTCC 303339 Query 282789 GATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAAC 282848 || || || || || || || || || ||||| |||| || | || || ||||| Sbjct 303338 TGTTGCCCTGGTCGTTGGCGATGATCTCCACTTTGCCATGCTGGAAAACCCCAACACAGG 303279 Query 282849 TAAAAGTTGTTCCTAAATCAATACCAATAGCAATT 282883 | || || || | ||| || ||||| | |||| Sbjct 303278 AGTAGGTGGTGCCCAGATCGATGCCAATGGAAATT 303244 >seq484 Length=430722 Score = 104 bits (114), Expect = 2e-16 Identities = 112/147 (76%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || || ||||| |||| || |||||||| || ||||| || || | || ||| Sbjct 385165 TTTTTGTCCAGGCCATAAGCAATGGCTGCAGCAGTGGGCTCATTGATGATGCGCAGCACA 385224 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 ||||| |||| || |||| |||||||| |||||||| | || || || || || || Sbjct 385225 TTAAGGCCAGAGATGGTTCCAGCATCTTTGGTGGCTTGACGCTGGGAGTCATTGAAGTAA 385284 Query 282452 GCAGGAACAGTAATAACGGCATCTGTT 282478 ||||||||||| || || |||| |||| Sbjct 385285 GCAGGAACAGTGATGACCGCAT-TGTT 385310 >seq2193 Length=95501 Score = 93.3 bits (102), Expect = 3e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || || || || |||| |||||||||||| || || || || || | | ||| Sbjct 16423 TTTTTGTCCAGGCCGTAAGCAATAGCAGCAGCAGTCGGCTCGTTGATGATACGAAGGACA 16364 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 ||||| |||| |||| | ||||||||||| ||||| || | || || || || || || Sbjct 16363 TTAAGGCCAGAAATTGTCCCTGCATCTTTGGTGGCCTGGCGCTGAGAGTCATTGAAGTAG 16304 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTAC 282480 ||||| || || | || |||| ||| || Sbjct 16303 GCAGGCACGGTCACGACAGCATTTGTCAC 16275 >seq327 Length=760595 Score = 93.3 bits (102), Expect = 3e-13 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 |||| | || ||||| || || | ||| | |||| |||||||||||||||||||| Sbjct 122791 CAAAGACTGTGTTGGTGGGGTTCATGGCAACCTGATTCTTGGCTGCATCTCCAATCAGCC 122850 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 || | ||||| || | ||||| || || || | || || |||||||| |||| Sbjct 122851 TCTCACTATCTGTGAAGGCCACATAGCTGGGTGTGGTCCTGTTGCCCTGATCATTGGCAA 122910 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 | |||||||||||||||| || | ||||| ||||| | || || || | ||| | Sbjct 122911 TGATTTCAACTTTACCATGCTGGAACACACCAACACAGGAGTAGGTGGTCCCAAGATCGA 122970 Query 282870 TACCAA 282875 |||||| Sbjct 122971 TACCAA 122976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739137201129564