Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1673 149 1e-30 SEQ16359 145 1e-29 seq365 132 9e-26 seq510 102 2e-16 >seq1673 Length=142529 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | |||||| || | ||| || || || || ||||| || || || ||||| Sbjct 266 CCTCCACGGAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 207 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || ||||||||||| || || || || || ||||| Sbjct 206 AGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 147 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| || ||||| ||||||||||| ||||| ||||| || || | || || || Sbjct 146 ATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACC 87 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || |||||||| || | ||||| ||||| |||||||| Sbjct 86 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 40 >SEQ16359 Length=2539 Score = 145 bits (160), Expect = 1e-29 Identities = 166/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 82588 CTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAA 82647 |||||| |||||| || | ||| || || || || ||||| || || || || || || Sbjct 2539 CTCTCAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGG 2480 Query 82648 TTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTC 82707 | | ||| |||||||| || || ||||||||||| || | ||| || || ||||| || | Sbjct 2479 TGCGACCATCTTCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGC 2420 Query 82708 CTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCA 82767 |||| || || || ||||||||||| ||||| || || || || | || || || |||| Sbjct 2419 CTTCTTTGTCCTGGATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCA 2360 Query 82768 AAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || || || |||| ||||| ||||| |||||||| Sbjct 2359 GGGTGATTGTTTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 2317 >seq365 Length=500478 Score = 132 bits (146), Expect = 9e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || |||| |||||| || | ||| || || ||||| ||||| || || || ||||| Sbjct 3806 ACCACCCCTCAGACGCAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGA 3865 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | | || ||||| || || || ||||||||||| | || || || || || || Sbjct 3866 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGG 3925 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || || ||||| || || ||||| || || ||||| || || || ||| | || || || Sbjct 3926 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCCAC 3985 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || ||||| || || | ||||| ||||| |||||||| Sbjct 3986 CTCCAGGGTGATGGTCTTACCAGTGAGTGTCTTGACAAAGATCTGCAT 4033 Score = 102 bits (112), Expect = 2e-16 Identities = 133/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || |||| |||||| || | ||| || || ||||| ||||| || || || ||||| Sbjct 9160 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 9219 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | |||||||| || || || ||||||||||| | || || || || || || Sbjct 9220 AGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 9279 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| || || || ||||| || || ||||| || || || || | || || || Sbjct 9280 ATGCCTTCTTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCGCTGGGCTCAACC 9339 Query 82764 TCCA 82767 |||| Sbjct 9340 TCCA 9343 >seq510 Length=807390 Score = 102 bits (112), Expect = 2e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 || || || ||||||||||| || | ||| || || ||||| || ||||| || || || Sbjct 1575 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 1634 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 ||||||||||| ||||| || || || || | || || || |||| || || || || Sbjct 1635 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 1694 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCAT 82810 || |||| ||||| ||||| |||||||| Sbjct 1695 CCAGTCAGGGTCTTCACAAAGATCTGCAT 1723 Score = 102 bits (112), Expect = 2e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 || || || ||||||||||| || | ||| || || ||||| || ||||| || || || Sbjct 4235 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 4294 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 ||||||||||| ||||| || || || || | || || || |||| || || || || Sbjct 4295 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 4354 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCAT 82810 || |||| ||||| ||||| |||||||| Sbjct 4355 CCAGTCAGGGTCTTCACAAAGATCTGCAT 4383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981444602190346