Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq3796 105 9e-18 seq993 104 3e-17 seq744 104 3e-17 seq2115 93.3 6e-14 seq915 91.5 2e-13 seq160 91.5 2e-13 seq3624 89.7 7e-13 seq2908 87.8 2e-12 >seq3796 Length=36161 Score = 105 bits (116), Expect = 9e-18 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 8651 GCCTTAT-TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGG 8709 || |||| ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||| Sbjct 28170 GCTTTATCTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGG 28229 Query 8710 TTCGATTCCCCGACGAGGAG 8729 ||||||||||||||| |||| Sbjct 28230 TTCGATTCCCCGACGGGGAG 28249 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 28178 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 28237 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 28238 CCCGACGGGGAG 28249 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 28249 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 28190 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 28189 TACTAACGAGGA 28178 >seq993 Length=254094 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 147893 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 147952 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 147953 CCCGACGGGGAG 147964 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 158340 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 158399 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 158400 CCCGACGGGGAG 158411 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 147893 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 147952 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 147953 CCCGACGGGGAG 147964 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 158340 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 158399 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 158400 CCCGACGGGGAG 158411 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 147965 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 147906 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 147905 ATACTAACGAGGA 147893 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 158412 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 158353 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 158352 ATACTAACGAGGA 158340 >seq744 Length=314959 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 249878 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 249937 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 249938 CCCGACGGGGAG 249949 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 249878 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 249937 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 249938 CCCGACGGGGAG 249949 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 249950 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 249891 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 249890 ATACTAACGAGGA 249878 Score = 86.0 bits (94), Expect = 8e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 8668 TATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACGAGG 8727 ||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||||| || Sbjct 242532 TATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGACGGGG 242591 Query 8728 AG 8729 || Sbjct 242592 AG 242593 Score = 84.2 bits (92), Expect = 3e-11 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 11740 TATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACGAGG 11798 ||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||||| || Sbjct 242532 TATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGACGGGG 242591 Query 11799 AGG 11801 ||| Sbjct 242592 AGG 242594 >seq2115 Length=101419 Score = 93.3 bits (102), Expect = 6e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 8649 ATGCCTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGG 8708 || || | ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||| Sbjct 21391 ATTCCATCTTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGG 21450 Query 8709 GTTCGATTCCCCGACGAGGAG 8729 |||||||||||||||| |||| Sbjct 21451 GTTCGATTCCCCGACGGGGAG 21471 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 21400 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 21459 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 21460 CCCGACGGGGAG 21471 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | ||||| Sbjct 21472 ACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 21413 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 21412 ATACTAACGAGGA 21400 >seq915 Length=266871 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 78288 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 78347 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 78348 CCCCGACGGGGAG 78360 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 78289 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 78348 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 78349 CCCGACGGGGAG 78360 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | ||||| Sbjct 78361 ACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 78302 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 78301 ATACTAACGAGGA 78289 >seq160 Length=713727 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 552057 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 552116 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 552117 CCCCGACGGGGAG 552129 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 552058 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 552117 Query 11789 CCCGACGAGGAGGGA 11803 ||||||| |||| || Sbjct 552118 CCCGACGGGGAGTGA 552132 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | ||||| Sbjct 552130 ACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 552071 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 552070 ATACTAACGAGGA 552058 >seq3624 Length=62757 Score = 89.7 bits (98), Expect = 7e-13 Identities = 66/77 (86%), Gaps = 4/77 (5%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGG----AGACCGGGGTTCG 8713 ||||||||||||||||||| ||||| |||| ||||| | |||| ||||||||||| | Sbjct 60386 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGGGCCAGACCGGGGTTTG 60327 Query 8714 ATTCCCCGACGAGGAGC 8730 ||||||||||| ||||| Sbjct 60326 ATTCCCCGACGGGGAGC 60310 Score = 86.0 bits (94), Expect = 8e-12 Identities = 66/77 (86%), Gaps = 5/77 (6%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGG----AGACCGGGGTTC 11783 |||||||||||||||||||| ||||| |||| ||||| | |||| ||||||||||| Sbjct 60387 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGGGCCAGACCGGGGTTT 60328 Query 11784 GATTCCCCGACGAGGAG 11800 |||||||||||| |||| Sbjct 60327 GATTCCCCGACGGGGAG 60311 >seq2908 Length=60829 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| |||| | ||| |||||||||||||||| Sbjct 38134 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTTACGCGGAAGACCGGGGTTCGATT 38075 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 38074 CCCCGACGGGGAG 38062 Score = 82.4 bits (90), Expect = 1e-10 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| |||| | ||| ||||||||||||||||| Sbjct 38133 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTTACGCGGAAGACCGGGGTTCGATTC 38074 Query 11789 CCCGACGAGGAGGGA 11803 ||||||| |||| || Sbjct 38073 CCCGACGGGGAGTGA 38059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652596604728160