Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq49 284 1e-71 seq1673 134 1e-26 SEQ16359 127 2e-24 seq365 120 3e-22 seq510 107 2e-18 seq56 107 2e-18 >seq49 Length=1117640 Score = 284 bits (314), Expect = 1e-71 Identities = 1005/1553 (65%), Gaps = 58/1553 (4%) Strand=Plus/Minus Query 148237 TCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCA 148296 ||||||| | || ||||| | || || | ||||||||| || | || || | || Sbjct 732439 TCAGGTCTTTGAGCAGATGAGGGTTGACGATCTGAAACTCTCCCGACAGAACCCTGCGGG 732380 Query 148297 GATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCG 148356 || | |||||| || | | ||| | |||||||||||||||| ||||| ||||| | Sbjct 732379 TGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGG 732320 Query 148357 TTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT---ATTT 148413 || |||||||| || | |||||| ||| | || ||| || ||| |||| Sbjct 732319 AGGCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCA---CGCCATGTTTGGCGATTT 732263 Query 148414 TGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACT 148473 | |||||| | |||||||||||| | ||| ||| | |||||||||||||| Sbjct 732262 TCTCCTTCAGCAGCTTCCAGTCCCAGAGATCGGTCGGCGTCTTCTCCCACATGTCGTACT 732203 Query 148474 GCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCG 148533 |||| ||||| ||| | ||| ||||||||||| ||| || ||| || | |||| Sbjct 732202 GCAGGATGCCCTTGCTGACCGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAGCTCGGCCG 732143 Query 148534 CCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGA 148593 |||| |||||||||||||| || ||| |||||||||| || ||| || || |||||| Sbjct 732142 CCAGCTCGCAGCTCGCCTCCAGAGCGGCGTAGTAAATGGTTTCGAAGATGTGGATGTTGA 732083 Query 148594 GCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGC 148653 |||| ||| |||||| |||| ||||| | | || |||||||| | | Sbjct 732082 GCAGTTGAGCCTCTGGGCTTTCAAACGGGTGACGCATGAGAATGAAGGCGTCGGCTAAAC 732023 Query 148654 CCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG--AG 148711 |||| || || | || || |||| ||| |||| ||| | || ||| || | Sbjct 732022 CCTGGACTCCGATTCCGATCGGCCTGTGGCGCTTGTTCGAG-TTCTCG-GCTTCCGGTAC 731965 Query 148712 CGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGT-AATTC 148770 ||| |||| |||| ||||| ||||||| || || || | || || || | | Sbjct 731964 CGGGTAGTAGTTGATCTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTCACATA 731905 Query 148771 TGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATG-----CATCGGTTCACGGCGAT 148825 ||| ||| | |||||| | | ||| | || ||| ||| | |||||| Sbjct 731904 TGC-CAGTTTCTTAAAATCAAAAGTCCGCTCTGGGGTGACGTACAT--GTTGAGGGCGAT 731848 Query 148826 AGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCA 148885 ||||| || || || || || ||| ||| | | |||| || || || |||| ||| Sbjct 731847 GGAGGCCAGGTTACAGACCGCTACCTCGTCCTTGCTGGTGTATTCAACAATTTCGGTGCA 731788 Query 148886 CAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTC 148945 ||| |||||||| || || ||||| |||| || |||||||| |||||||| ||||| Sbjct 731787 CAGGTTGCTGCACTTTATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTC 731728 Query 148946 CTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG------AACCG 148999 |||||||||||||| || ||||| || ||||| || | ||| || | Sbjct 731727 TTTGTACAGCATGTATGGCGTTCCAGTCTCTGTCTGCGACTCAATGATGGCGTACCACAG 731668 Query 149000 ATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATA 149059 ||| | ||| | | ||| ||| | | | ||||||| ||| || || || Sbjct 731667 CTGCTGAGCCTTCAC---CACACGCTTGGCCTTG---CCCTCCTTCTCATACCTGGTGTA 731614 Query 149060 CAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACAT 149119 ||| ||| ||| |||| || |||| || || ||||| ||||| || || ||||| Sbjct 731613 GAGCTTCTCAAACTCCTCCCCCCAGCACTCATCCAGACCAGGGCAGGCGTTGGGACACAT 731554 Query 149120 GAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGC 149179 || ||||| | || | ||| | |||||| |||||||| || | ||| | || Sbjct 731553 CAGAGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAACAGATCAGGGATCCACATGGC 731494 Query 149180 GTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCAC 149239 ||| | ||||| | ||| | || || || |||| ||| | || | Sbjct 731493 GTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAA 731434 Query 149240 GCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCC------CTTGCG 149293 | ||| | ||| |||||| ||||| | ||||| |||| || || |||| Sbjct 731433 GTCGAACACGTCAAAGTGCCAGGGCTCTAGGTACATGGCGAAGGCTCCGGGTCTCTTG-- 731376 Query 149294 CTTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAAT 149353 ||||| ||||||||||||| ||| || ||||||| | |||| | ||| || | | Sbjct 731375 -TTGCCCCCCTGGTCGACGTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAG 731317 Query 149354 GCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTG-TGCA 149412 || ||| | ||||| || || | | || || || | || | || |||| Sbjct 731316 CCCGTTGGAGTTTCCGTTGGT---GCCA--GAGA-TGTAGCTCCCTGTAGATCTGATGCA 731263 Query 149413 CGTTG------ACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCG 149466 | || || |||||||| || | |||| |||||| || || | |||| Sbjct 731262 -GCTGACCGCCACACCGATGCCTCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCG 731204 Query 149467 TCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTT 149526 | ||||||||| || ||||||||| |||||||| ||||| ||||| | ||| | Sbjct 731203 TGTCGTAGATGCCTTCAATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCT 731144 Query 149527 GCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGC 149586 | || || || || ||| | || ||| |||||| || || | |||| Sbjct 731143 GAGGCCTGTTGGTCCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAACCACTTCTCTG 731084 Query 149587 TCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCC--ATGGATGCCTATGGC 149644 || || | ||| | ||| | | | || || || || | ||||| |||| | Sbjct 731083 ACAGCAGGTTGTAGGTCTCAATCGCTGCATCGATATC--CGTCTTGTGGATTCCTACAGA 731026 Query 149645 GACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTA 149704 ||| | ||| ||||| |||||||||||||| ||||||||| || || |||| ||| Sbjct 731025 GACTCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTA 730966 Query 149705 GCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGT 149757 || || |||||| |||| ||| | |||||| || || ||| ||| Sbjct 730965 CGAACGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTAGGAGAAATCTCGGTCGT 730913 >seq1673 Length=142529 Score = 134 bits (148), Expect = 1e-26 Identities = 153/203 (75%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || || ||| | | | || || |||||||| | Sbjct 237 GGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCA-TCTTCCAGCTGCTTAC 179 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| |||||||||||||| ||||| ||||||| | Sbjct 178 CAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTGTCTTGGATCTTTGCTT 119 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| |||||| |||||||||| || | ||||| ||| ||||| || || | Sbjct 118 TCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGGG 59 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || || || ||||||||| || Sbjct 58 TCTTCACAAAGATCTGCATGCCT 36 >SEQ16359 Length=2539 Score = 127 bits (140), Expect = 2e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| ||| | || || |||||||| | Sbjct 2514 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCA-TCTTCTAGCTGCTTAC 2456 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || || || |||||||| |||||||||||||| ||||| ||||||| | Sbjct 2455 CAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGGATCTTTGCTT 2396 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | |||||| |||||||||| || | ||||| ||||| || ||||| | Sbjct 2395 TCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTACCAGTCAGGG 2336 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 2335 TCTTCACAAAGATCTGCAT 2317 >seq365 Length=500478 Score = 120 bits (132), Expect = 3e-22 Identities = 148/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||||| ||||| || || ||||| || | ||| | | | || || |||||||| | Sbjct 4123 GGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTTC 4181 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | || ||||||||| ||||| |||||||||||||| |||||| | Sbjct 4182 CAGCGAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTT 4241 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| ||||| ||||||| || |||| ||||| |||||| || || || | Sbjct 4242 TCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTGAGTG 4301 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || ||||| ||||||||| Sbjct 4302 TCTTGACGAAGATCTGCATG 4321 Score = 114 bits (126), Expect = 1e-20 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || ||||||||||| ||| | || | || ||||||||| || || |||||||| ||| Sbjct 9658 TCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCTTTG 9717 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||| || ||||| | ||||| ||||| |||||||||| || | ||||| | Sbjct 9718 TCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCTAGGGTGATG 9777 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| || || ||||| || || ||||||||| Sbjct 9778 GTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCATG 9813 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||||| || ||||| || ||||| || | ||| |||||| ||||||||||| Sbjct 8961 GGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCC 9020 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | || |||||| || || || |||||||| ||||| |||||| || Sbjct 9021 AGCGAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCCTGGATCTTAGCTTT 9080 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||| | ||||| ||||||| || || | ||||| |||||| || || || || Sbjct 9081 CACGTTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTTTTACCAGTGAGTGT 9140 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 9141 CTTGACGAAGATCTGCATG 9159 Score = 105 bits (116), Expect = 6e-18 Identities = 145/200 (73%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||||| || ||||| || ||||| || | ||| | | | || || |||||||||| Sbjct 3836 GGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 3894 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | || ||||||||| || || ||||| |||||||| |||||| || Sbjct 3895 CAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCT 3954 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||| | ||||| |||||||||| || | ||||| ||| || || || || | Sbjct 3955 TGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTGAGTG 4014 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || || || ||||||||| Sbjct 4015 TCTTGACAAAGATCTGCATG 4034 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||||| || ||||| || ||||| || | ||| ||| || ||||||||||| Sbjct 9189 GGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCTTCCAGCTGCTTGCC 9248 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | || ||||||||| || || |||||||| ||||| |||||| ||| Sbjct 9249 AGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCTTAGCCTT 9308 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGG 133626 || | ||| | |||||| ||||||| || || | ||||| || Sbjct 9309 GACATTCTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGG 9352 >seq510 Length=807390 Score = 107 bits (118), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 133512 AGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTG 133571 |||||||| || || | || || || |||||||| |||||||||||||| ||||| | Sbjct 1575 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 1634 Query 133572 ATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 |||||| || | | ||| | |||||| |||||||||| || | ||||| ||||| Sbjct 1635 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 1694 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || || || |||||||| Sbjct 1695 CCAGTCAGGGTCTTCACAAAGATCTGCAT 1723 Score = 107 bits (118), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 133512 AGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTG 133571 |||||||| || || | || || || |||||||| |||||||||||||| ||||| | Sbjct 4235 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 4294 Query 133572 ATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 |||||| || | | ||| | |||||| |||||||||| || | ||||| ||||| Sbjct 4295 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 4354 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || || || |||||||| Sbjct 4355 CCAGTCAGGGTCTTCACAAAGATCTGCAT 4383 >seq56 Length=1093683 Score = 107 bits (118), Expect = 2e-18 Identities = 91/112 (81%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923 |||| ||||||||||| | |||||| ||||| ||||||| ||||| || | || | Sbjct 335792 TGTATTCTACGATCTCTGTGCACAGGTTGCTAGATTTGATGGTGCCCAGATTTTGCTGGT 335851 Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975 ||||||| |||||||| |||||||||||||||||||||||| || ||||| Sbjct 335852 TGCTCTTCCTGTTGCAGGCGTCCTTGTACAGCATGTACGGTGTCCCGGTTTC 335903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483237015497360