Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq7 120 4e-22 >seq7 Length=1729193 Score = 120 bits (132), Expect = 4e-22 Identities = 491/761 (65%), Gaps = 21/761 (3%) Strand=Plus/Minus Query 162243 CACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGGAGGT 162302 |||||| || || ||| |||||| || | | || || || |||||||| || || Sbjct 1185071 CACATCTCCTTCCAGGTAGCTCCACTTGACCACACGAGCGAAGGCATGCATGTCTGACGT 1185012 Query 162303 GTCGTACTTGTACACTGACGGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAGTAGC 162362 || |||||| || || || | |||||||| |||| ||||||||||| || Sbjct 1185011 ATCATACTTGATGTTAGAGGGTACTGACCCAGGAACTGAAGGCATCCTCTGTAGAGTGGC 1184952 Query 162363 CCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGACCGT 162422 ||||||||| || || || || ||||| |||||| |||||||| ||||| |||| | Sbjct 1184951 CCACAGGTGCTCATCGGGGCTGTACGTGTCCTTCTCCCACTCCAGGAACT-TCTGAATAT 1184893 Query 162423 -TTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTACCAG 162481 | | || | || | | ||| ||| || || || | |||||| || | |||| Sbjct 1184892 CTCTGTCCTCTAACACATGCTTGACAAAGGCTCTTGTAACCACAAAGTAGGCATTTCCAG 1184833 Query 162482 AAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACCATTC 162541 |||| ||| ||| || || ||||| ||| | | || || | ||| | Sbjct 1184832 TGAACATGGGGCTGCTGATGGGCGGGGGGCTTTTCGCCACATATGTATTTATGACCGTGT 1184773 Query 162542 CCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACG--GGT--GT 162597 || ||| ||| | | ||| | || ||| || |||| | ||| Sbjct 1184772 CCGTGACGTTGTAGTG---ATACTGCCAGCGGG----CTTTCTTGTAGTTGTTGGTCACC 1184720 Query 162598 TCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGATTG 162657 || |||| | ||||| || | ||||||||| |||||||||| ||| Sbjct 1184719 TCACTCTCCATGCTGTTCTTTCCATTGAGGGCCTTCAGTGTTTTCACCATCTCTCCATTT 1184660 Query 162658 GTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACT-TAACGCTGA- 162715 || || | ||| ||||| || || ||| || | | || |||| | || | ||| Sbjct 1184659 GTTTTGATGGGGAAGTCTGTCCCACAGGTGTTCAGCAGGTACCTCCAGTCTATTGGTGAC 1184600 Query 162716 GTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACA 162775 || || ||||||| | ||||||||||| ||||| || | ||| || ||||||| Sbjct 1184599 TTCAGT--AGATCCTTCATGCAGTTCAGATCAGCCTGCACTCTGGACCATGAAGCGTACA 1184542 Query 162776 CGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCA 162835 | || || |||||| || |||| ||||| ||||| || || ||||| || | || Sbjct 1184541 CCACCCTTTCCAACTTACTGGCTACAAACACATTAGGAAAGCATGAAACAATGGCATCCA 1184482 Query 162836 CGGC-CAGTGAGA-ACATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTG 162893 | || ||| | | || | | |||||| || || ||||||||||| | ||||| Sbjct 1184481 CAGCTTTCTGAAAGTCTTCAG--AGGATTTCCTGTCCACATGTACGCAGTAGATGTTCTG 1184424 Query 162894 AGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGAT 162953 ||| ||||| | || | || | || || ||||| | ||||| | || ||||| || Sbjct 1184423 AGGAGCGTACACAGCTCGGAGAAGTCGTTCAAACATGTTAATCTTCTCATGGACCACCAT 1184364 Query 162954 AGAATACGCTATGGGGAACTCAGCCTCCTCGCGACTGAGAG 162994 || ||||| ||||| || | ||||||| |||||||| Sbjct 1184363 TGAGTACGCAATGGGAAAGTTTTCCTCCTCTTCACTGAGAG 1184323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578212094614400