Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq49 215 5e-51 SEQ16359 113 4e-20 seq1673 98.7 9e-16 seq56 89.7 5e-13 seq510 84.2 2e-11 seq365 82.4 7e-11 >seq49 Length=1117640 Score = 215 bits (238), Expect = 5e-51 Identities = 982/1531 (64%), Gaps = 52/1531 (3%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| | |||||||| |||| ||| || | | | || | ||||| ||| | | Sbjct 732416 TTGACGATCTGAAACTCTCCCGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCT 732357 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || | ||||| || ||||| | || ||||| |||| || || ||||| |||| | Sbjct 732356 TCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGC 732297 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAA-AGTTTGCCAGTCCCA 147071 | || || | || || | ||| || ||||||| || || ||||||||| Sbjct 732296 AGCAGGCTGTTCCTCACGCCATGTTTGGCGATTTTCTCCTTCAGCAGCTT-CCAGTCCCA 732238 Query 147072 CA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 | ||| | |||||| | ||||||||||||||| || | || ||| | || Sbjct 732237 GAGATCG--GTCGGCGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACCGGG 732180 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGC-GCCAATTCACAGCTTGCCTCGAG 147188 ||| || |||| |||| ||| || | || |||| || ||||| ||||| || Sbjct 732179 GAGCCCTCGTACGTCTCGTAGGGGCCGA-GCTCGGCCGCCAGCTCGCAGCTCGCCTCCAG 732121 Query 147189 CGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTC 147248 || | ||||| ||||||||| ||| || |||| || | || ||| ||| || Sbjct 732120 AGCGGCGTAGTAAATGGTTTCGAAGATGTGGATGTTGAGCAGTTGAGCCTCTGGGCTTTC 732061 Query 147249 GTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGG 147308 | || ||||| || | ||||| ||||| |||||||||| |||| ||||| || Sbjct 732060 AAACGGGTGACGCATGAGAATGAAGGCGTCGGCTAAACCCTGGACTCCGATTCCGATCGG 732001 Query 147309 TCGATG---CTT-TTCGT-TGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCA 147363 | || ||| |||| | || ||||| || || || |||| |||| || Sbjct 732000 CCTGTGGCGCTTGTTCGAGTTCTCGGCTTC-----CGGTACCGGGTAGTAGTTGATCTCG 731946 Query 147364 ATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCA 147423 ||||||||||| ||||| || | ||||| || | | ||||||| |||||| Sbjct 731945 ATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTCACATATGCCAGTTTCTTAAAATCA 731886 Query 147424 TAAGTCCCGTCTTCGAC-ACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGAC 147482 |||||| ||| | |||||| || ||| | |||||| || ||||| || ||||| Sbjct 731885 AAAGTCCGCTCTGGGGTGACGTAC--AT--GTTGAGGGCGATGGAGGCCAGGTTACAGAC 731830 Query 147483 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTAT 147542 || ||| || | | |||| | || ||||||| ||||||||||||||| ||||| Sbjct 731829 CGCTACCTCGTCCTTGCTGGTGTATTCAACAATTTCGGTGCACAGGTTGCTGCACTTTAT 731770 Query 147543 GACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 | |||| ||| ||||| ||||| |||| ||||| ||||||||| | |||||||| || Sbjct 731769 GGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTATGG 731710 Query 147603 TCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTA-TGCAGGTCCTGCGC--TC-GCA 147658 || ||||| |||| |||| ||| | || ||| | ||| || || || Sbjct 731709 CGTTCCAGTCTCTGTCTGCGACTCAATGAT-GGCGTACCACAGCTGCTGAGCCTTCACCA 731651 Query 147659 CCCGC-TGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCG 147717 | ||| || | | |||||| || || |||| ||| | | ||||||||| || Sbjct 731650 CACGCTTGGCCTT----GCCCTCCTTCTCATACCTGGTGTAGAGCTTCTCAAACTCCTCC 731595 Query 147718 CCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCC 147777 || |||| || | || || || || | ||||||||||| ||||| | || Sbjct 731594 CCCCAGCACTCATCCAGACCAGGGCAGGCGTTGGGACACATCAGAGACCAGTCCTGGTTG 731535 Query 147778 GCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGC--GCG 147835 | || | ||| |||||||| || | ||||| ||||| | ||| || | || Sbjct 731534 CTCTCCACTCTCTTCATGAACAGATCAGGGATCCACATGGCGTAGAAAAGGTCTCTGGCC 731475 Query 147836 CTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCGT 147895 || ||| ||||| || |||| |||| | || | | | | ||| || Sbjct 731474 CTCTGC--TCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCAAAGT 731417 Query 147896 GCCAGGGTTCAATGTAGACGGCCAGCGCACC---TTTACGCTTTCCGCCCTGGTCGACAT 147952 ||||||| || | ||| | ||| | || || | | || || ||||||||||| | Sbjct 731416 GCCAGGGCTCTAGGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCCCCCCTGGTCGACGT 731357 Query 147953 GGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGG 148012 ||| || ||||||| | || | || |||||| | || ||| | | | ||||||| Sbjct 731356 AGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGTTGGAGTTTCCGTTGG 731297 Query 148013 TGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCA-----ATGCC 148067 || | ||| | ||| || | || | |||| | | ||||| ||||| Sbjct 731296 TGCCAGAGATGTAGCTCCCTGTAGATC-----TGATGCAGCTGACCGCCACACCGATGCC 731242 Query 148068 GCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCT 148127 || | |||| || ||| || || | || || ||||||||| || ||||| Sbjct 731241 TCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCGTAGATGCCTTCAATGCT 731182 Query 148128 GTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGA 148187 ||||| || | | | |||| || || ||| || || | || || || Sbjct 731181 GTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGAGGCCTGTTGGTCCCAGCGTT 731122 Query 148188 GAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAAT 148247 ||| || || || ||||| || ||| | || | || || | || |||||||| Sbjct 731121 GAAGAGAGTCGGGGAGGCGTGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTCTCAAT 731062 Query 148248 AGCGTCTTCGATGT-CGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTG 148306 || | ||||| | |||| ||| || || | | ||| | ||||||||||||||| | Sbjct 731061 CGCTGCATCGATATCCGTC-TTGTGGATTCCTACAGAGACTCTCATGAGCATGTGCTGCG 731003 Query 148307 GTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAAC 148366 |||| ||||| |||| ||||||||| || || || | || || || ||| | | Sbjct 731002 GTCGCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTACGAACGCTCCAGAGTCTTGAAGC 730943 Query 148367 CAAAGTACTTGTAATCAAAATCTAGCTCGTA 148397 | ||| | ||||| |||||| | ||||| Sbjct 730942 CGAAGAAGTTGTAGGAGAAATCTCGGTCGTA 730912 >SEQ16359 Length=2539 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||| || | | | ||||| || || |||||||||||| | ||| || | Sbjct 2531 CGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCA 2472 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||| ||||| | | |||| ||||| || || || ||||| ||||||||||| Sbjct 2471 TCTTCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTG 2412 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || ||| ||||| | || | || ||| | |||||||| || | || | Sbjct 2411 TCCTGGATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATT 2352 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||||||||| || || | || |||||||| Sbjct 2351 GTTTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 2317 >seq1673 Length=142529 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||| || | | | ||||| || || ||||||||||| || ||| || | Sbjct 254 CGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCA 195 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||| ||||| | | |||| || | ||| || || ||||| ||||||||||| Sbjct 194 TCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTG 135 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || ||| ||||| | || | || ||| | |||||||| || | || | Sbjct 134 TCTTGGATCTTTGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATG 75 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 || || ||||| || || || | || ||||||||| || Sbjct 74 GTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATGCCT 36 >seq56 Length=1093683 Score = 89.7 bits (98), Expect = 5e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 147503 TGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGAT 147562 |||| | ||||| || | |||||||||||| |||| ||| |||| ||||||||| | Sbjct 335792 TGTATTCTACGATCTCTGTGCACAGGTTGCTAGATTTGATGGTGCCCAGATTTTGCTGGT 335851 Query 147563 TGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 147614 |||| |||| ||||| ||||| ||| | |||||||||||| ||||| || Sbjct 335852 TGCTCTTCCTGTTGCAGGCGTCCTTGTACAGCATGTACGGTGTCCCGGTTTC 335903 >seq510 Length=807390 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| ||||| | | |||| ||||| || || || ||||| ||||||||||| || Sbjct 1575 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 1634 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||| ||||| | || | || ||| | |||||||| || | || | |||||| Sbjct 1635 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 1694 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || | || |||||||| Sbjct 1695 CCAGTCAGGGTCTTCACAAAGATCTGCAT 1723 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| ||||| | | |||| ||||| || || || ||||| ||||||||||| || Sbjct 4235 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 4294 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||| ||||| | || | || ||| | |||||||| || | || | |||||| Sbjct 4295 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 4354 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || | || |||||||| Sbjct 4355 CCAGTCAGGGTCTTCACAAAGATCTGCAT 4383 >seq365 Length=500478 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || |||||||| ||||||||||| | ||| || |||||| ||||| || || | Sbjct 4127 GATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCG 4186 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | | ||| || || ||||| |||||||| || || || || ||||| Sbjct 4187 AAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTCACA 4246 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||||| || |||| || | ||||||||||| || || || Sbjct 4247 TTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTGAGTGTCTTG 4306 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 4307 ACGAAGATCTGCATG 4321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476430004337040