Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq327 158 2e-32 seq7405 140 5e-27 seq6510 129 8e-24 seq49 129 8e-24 seq3022 125 1e-22 seq354 125 1e-22 seq194 122 1e-21 seq3602 100 4e-15 seq56 89.7 7e-12 seq277 86.0 9e-11 >seq327 Length=760595 Score = 158 bits (174), Expect = 2e-32 Identities = 173/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||||||||| || || |||| ||| ||| ||||| Sbjct 116599 TACAAGGTGCTGAAGCAGGTGCACCCAGATAC-----GGGCATC-TCCTCCAAAGCCATG 116546 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| ||||| ||||||||||| |||| ||||||| | |||||| ||| Sbjct 116545 GGCATCATGAATTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGTGAGGCCTCCCGC 116486 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || ||||||| | ||| ||| | | | || |||||||||||||| || Sbjct 116485 CTGGCTCACTACAACAAGAGGTCCACCATCACCTCCAGGGAAATCCAGACCGCCGTCCGG 116426 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 116425 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 116377 >seq7405 Length=12082 Score = 140 bits (154), Expect = 5e-27 Identities = 169/229 (74%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||| || ||||| || || ||| |||| |||| || |||| | ||| Sbjct 8053 TACAAGGTACTGAAGCAAGTCCATCCCGACACCGG-----CATC-TCGTCCAAGGCTATG 8106 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| |||| |||||| |||| || |||| | ||||||| ||| Sbjct 8107 GGCATCATGAACTCGTTCGTCAGCGACATCTTCGAGCGTATCGCCGGCGAGGCCTCCCGC 8166 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 || || | || |||||||||| ||| ||| | | | ||||||||||| ||||| | Sbjct 8167 CTTGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACGGCCGTCAGG 8226 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 8227 CTGCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 8275 >seq6510 Length=10163 Score = 129 bits (142), Expect = 8e-24 Identities = 133/174 (76%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 724969 CCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG 725028 ||||| ||||||||||||||||||| |||||| |||| || |||| | ||||||| Sbjct 10150 CCATGGGCATCATGAACTCGTTTGTCAGCGACATCTTCGAGCGTATCGCCGGCGAGGCCT 10091 Query 725029 GTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088 |||||||| | || |||||||||| || ||| | | | ||||||||||| |||| Sbjct 10090 CCCGCCTGGCTCACTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCG 10031 Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | | ||| | ||| ||| || ||||||| |||||| || || |||||||||| Sbjct 10030 TCAGGCTGCTGCTGCCCGGTGAGCTGGCCAAGCACGCAGTGTCTGAGGGCACCA 9977 >seq49 Length=1117640 Score = 129 bits (142), Expect = 8e-24 Identities = 159/217 (73%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 ||||| ||| | | |||||||| ||| || || |||||||| |||||||| |||||| Sbjct 731155 TGCTTCCTGCTCGCCATGAAGGACGACAGCATTGAAGGCATCTACGACACGCTGAAGCAG 731214 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGC----G 260085 || || |||||||||||| | || || ||||||||| | || | || ||| | Sbjct 731215 TGTGCCCTCATCTCCAAGTCAGCTGGAGGCATCGGTGTGGCGG----TCAGCTGCATCAG 731270 Query 260086 CGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCT 260145 | | || |||| | | ||||||||||| | |||||||| || || |||||||| Sbjct 731271 ATCTACAGGGAGCTACATCTCTGGCACCAACGGAAACTCCAACGGGCTCGTCCCCATGCT 731330 Query 260146 TCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 | |||| ||| ||||||| ||||||||||||||| Sbjct 731331 GAGAGTTTACAACAACACGGCACGCTACGTCGACCAG 731367 Score = 93.3 bits (102), Expect = 6e-13 Identities = 131/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 262915 CATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATC 262974 |||||| || | ||| |||| |||| | |||||||| ||| | || | |||||| Sbjct 732274 CATGGCGTGAGGAACAGCCTGCTGCTGGCCCCGATGCCCACAGCCTCCACCGCCCAGATC 732333 Query 262975 CTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTC 263034 |||||||||| |||| | |||| | | ||| |||||||||||||| ||| | || || Sbjct 732334 CTGGGCAACAACGAGTCCATCGAAGCCTACACCAGCAACATCTACACCCGCAGGGTTCTG 732393 Query 263035 TCGGGCGACTTTACCGTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTG 263094 ||||| || ||| | ||||||| || ||| |||| | || || | | || ||| Sbjct 732394 TCGGGAGAGTTTCAGATCGTCAACCCTCATCTGCTCAAAGACCTGACGGAGAGAGGACTG 732453 Query 263095 TGGA 263098 |||| Sbjct 732454 TGGA 732457 >seq3022 Length=51774 Score = 125 bits (138), Expect = 1e-22 Identities = 167/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| || ||| |||| || | | | | ||| ||||| Sbjct 18326 TACAAGGTGCTGAAGCAGGTCCATCCCGATACCG----GCATTTCGTCTA-AAG-CCATG 18273 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 || |||||||| || |||| |||||| |||| || |||| | ||||||| || Sbjct 18272 GGCATTATGAACTCCTTCGTCAGCGACATCTTCGAGCGTATCGCCGGCGAGGCCTCCCGT 18213 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 || || | || |||||||||| ||| ||| | | | ||||||||||| ||||| | Sbjct 18212 CTTGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACGGCCGTCAGG 18153 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||| | ||||||||| ||||||||||||| Sbjct 18152 CTGCTGCTGCCCGGTGAGCTGGCTAAGCACGCCGTGTCCGAGGGCACCA 18104 Score = 114 bits (126), Expect = 2e-19 Identities = 164/229 (72%), Gaps = 8/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 || |||||||| |||||||| || ||| |||| |||| || || ||||| Sbjct 25068 TATAAGGTGCTGAAGCAGGTCCATCCCGACACCGG-----CATC-TCGTCTAAAGCCATG 25015 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || |||| |||||| |||| || |||| ||||||| || Sbjct 25014 GGCATCATGAACTCATTCGTCAGCGACATTTTCGAGCGTATCGCTGGCGAGGCCTCCCGT 24955 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 || || | || |||||||||| ||| ||| | | | |||||||||| |||| | Sbjct 24954 CTTGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGA--NCCGTCAGG 24897 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 24896 CTGCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 24848 >seq354 Length=503150 Score = 125 bits (138), Expect = 1e-22 Identities = 169/233 (73%), Gaps = 13/233 (6%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 || ||||||||||| |||||||| || || |||| |||| || |||| Sbjct 23897 ATGTACAAGGTGCTGAAGCAGGTTCATCCTGACACCGG-----CATC-TC------GTCC 23944 Query 724971 A-TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGG 725029 | || |||||||||||||| |||| |||||| | || || ||| | |||||| Sbjct 23945 AATGGGCATCATGAACTCGTTCGTCAGCGACATCTTTGAGCGGCTCGCCGGTGAGGCCTC 24004 Query 725030 TCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT 725089 ||||||| | || |||||||||| ||| ||| | | | ||||||||||||||||| Sbjct 24005 CCGCCTGGTTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGT 24064 Query 725090 GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | ||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 24065 CAGGCTGCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 24117 >seq194 Length=662014 Score = 122 bits (134), Expect = 1e-21 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017 ||||| || ||||| ||||||||||| || || |||||| || |||| ||||||| Sbjct 390521 CTCCAGCAGAGCCATGAGCATCATGAACTCCTTCGTGAACGACCTGTTCGAGCGCATCGC 390580 Query 725018 CACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGAT 725077 ||| ||||| || ||||| | | |||||||||| ||| ||| || | ||| | Sbjct 390581 CACAGAGGCGTCCCGGCTGGCTCAATACAACAAGCGCTCCACCATCACCAGCAGGGAGGT 390640 Query 725078 CCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGG 725137 ||||| || ||| | ||| | ||| ||| || ||||||| ||||||||| |||||||| Sbjct 390641 GCAGACGGCGGTGAGGCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGG 390700 Query 725138 CACCA 725142 ||||| Sbjct 390701 CACCA 390705 >seq3602 Length=33884 Score = 100 bits (110), Expect = 4e-15 Identities = 128/175 (73%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 724915 ACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGT 724974 |||||||||| |||||||| ||||| |||| |||| |||| |||| ||||| Sbjct 13710 ACAAGGTGCTGAAGCAGGTCCACCCAGACACCGG-----CATC-TCCACCAAGGCCATGA 13657 Query 724975 CGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCC 725034 |||||||||||||| ||||||||||| |||| || |||| | ||||||| || | Sbjct 13656 ACATCATGAACTCGTTCGTCAACGACATCTTCGAGCGGATCGCCGGCGAGGCCTCTCAGC 13597 Query 725035 TGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT 725089 ||| | |||||||||| ||| ||| | | | ||||||||||| || || Sbjct 13596 TGGTTCAGCACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACAGCAGT 13542 >seq56 Length=1093683 Score = 89.7 bits (98), Expect = 7e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 262091 CAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTAC 262150 ||| | |||| ||||| ||| | | || | || ||||| || || |||||| | ||| Sbjct 335936 CAGCTGTGGTACGCCATCATCGAGTCACAGACAGAAACCGGGACACCGTACATGCTGTAC 335877 Query 262151 AAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAGGCCAAC 262210 ||||||||| |||| || ||||||||||| || |||||||||| | | |||| Sbjct 335876 AAGGACGCCTGCAACAGGAAGAGCAACCAGCAAAATCTGGGCACCATCAAATCTAGCAAC 335817 Query 262211 CTGTGCACCGAGATCGT 262227 |||||||| |||||||| Sbjct 335816 CTGTGCACAGAGATCGT 335800 >seq277 Length=566994 Score = 86.0 bits (94), Expect = 9e-11 Identities = 88/114 (77%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 |||||||||||| ||||| || ||||| ||| | |||||||||| ||||| Sbjct 256505 GAGCCGCTGCTGAAAGATAATCCTCGTCGCTTCGTCATCTTCCCCATCCAGTACCACGAC 256564 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGT 1455829 || ||| | |||||| || |||||||||||||| || ||||| || |||||||| Sbjct 256565 ATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACGGCAGAGGAGGT 256617 Score = 86.0 bits (94), Expect = 9e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1455979 GAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTAC 1456038 ||||| || | || || || |||||||||||||| || ||||||||||| || | ||| Sbjct 256899 GAGGCCCGCTGTTTCTATGGTTTCCAGATCGCCATGGAGAACATCCACTCAGAGATGTAC 256958 Query 1456039 TCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 |||||||||||||||||| ||||||| || Sbjct 256959 AGCCTCCTGATCGACACCTACATCAAGGAGCC 256990 Score = 86.0 bits (94), Expect = 9e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1455979 GAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTAC 1456038 ||||| || | || || || |||||||||||||| || ||||||||||| || | ||| Sbjct 272697 GAGGCCCGCTGTTTCTATGGTTTCCAGATCGCCATGGAGAACATCCACTCAGAGATGTAC 272638 Query 1456039 TCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 |||||||||||||||||| ||||||| || Sbjct 272637 AGCCTCCTGATCGACACCTACATCAAGGAGCC 272606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7174877713799068