Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value SEQ16359 134 1e-26 seq1673 131 2e-25 seq365 123 2e-23 seq510 111 1e-19 >SEQ16359 Length=2539 Score = 134 bits (148), Expect = 1e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || | || || ||||||||||| ||||| Sbjct 2508 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTCTAGCTGCTTACCAGCAAA 2449 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||||| | ||| | || || |||||| ||||||| |||| | | Sbjct 2448 GATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGGATCTTTGCTTTCACATT 2389 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | |||||||||| ||||| |||||||| |||| || ||||| Sbjct 2388 CTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTACCAGTCAGGGTCTTCAC 2329 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 2328 AAAGATCTGCAT 2317 >seq1673 Length=142529 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 ||||| ||||| | | || ||||| || | || |||||| || |||||||| || Sbjct 269 TTTCCTCCACGGAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 210 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | || ||| || | || |||||||||||||| ||||| |||| || ||||||||| | | Sbjct 209 GACAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGA 150 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 || | || || ||||| ||||||| |||| | | | | |||||||| | ||| Sbjct 149 GGGATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTCTCAATGGTGTCGCTGGGCTCC 90 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| ||||| || || || || | || |||||||| |||||||| Sbjct 89 ACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 40 >seq365 Length=500478 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 3843 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 3902 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||||| ||||||||| | |||| || |||||||||| |||||| ||| | | | Sbjct 3903 ATCAACCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTC 3962 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | |||||||||| ||||| || ||||| || | || || ||| Sbjct 3963 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTGAGTGTCTTGACA 4022 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 4023 AAGATCTGCAT 4033 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||| |||||||| || | | ||| || | || ||||||||||| || || || Sbjct 4130 TCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCGAAG 4189 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||||| ||||||||| | ||||| || ||||||||| |||||| |||| | | Sbjct 4190 ATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTC 4249 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | ||||| |||||||| || | || || || Sbjct 4250 TCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTGAGTGTCTTGACG 4309 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 4310 AAGATCTGCAT 4320 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | ||| || |||| ||||||||||| || || || Sbjct 8968 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAG 9027 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||||| |||||| || | |||| || || |||||| |||||| |||| | Sbjct 9028 ATCAACCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCCTGGATCTTAGCTTTCACGTTC 9087 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||||| ||||| |||||||| || | || || || Sbjct 9088 TCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTTTTACCAGTGAGTGTCTTGACG 9147 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 9148 AAGATCTGCAT 9158 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | ||| || |||| ||||||||||| || ||||| Sbjct 9196 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCAAAG 9255 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||||| ||||||||| | |||| || || |||||| |||||| ||| | | | Sbjct 9256 ATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCTTAGCCTTGACATTC 9315 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGAT 35700 | | |||||||| | || ||||||| ||||| Sbjct 9316 TCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGAT 9350 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || ||||||||||| || || || ||||||| ||||||||| | |||| || || ||| Sbjct 9658 TCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCTTTG 9717 Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701 ||| ||| || ||| | | | | | ||||| || | |||||||| | ||||| Sbjct 9718 TCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCTAGGGTGATG 9777 Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || || | ||||||||||| |||||||| Sbjct 9778 GTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 9812 >seq510 Length=807390 Score = 111 bits (122), Expect = 1e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||||||||| ||||| |||| || |||||||| | ||| | || || |||||| | Sbjct 1575 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 1634 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 |||||| |||| | | | | |||||||| | |||||||||| ||||| |||||| Sbjct 1635 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 1694 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| || |||||||| |||||||| Sbjct 1695 CCAGTCAGGGTCTTCACAAAGATCTGCAT 1723 Score = 111 bits (122), Expect = 1e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||||||||| ||||| |||| || |||||||| | ||| | || || |||||| | Sbjct 4235 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 4294 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 |||||| |||| | | | | |||||||| | |||||||||| ||||| |||||| Sbjct 4295 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 4354 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| || |||||||| |||||||| Sbjct 4355 CCAGTCAGGGTCTTCACAAAGATCTGCAT 4383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450622219543120