Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value SEQ16359 125 7e-24 seq1673 118 1e-21 seq365 116 4e-21 seq49 100 3e-16 >SEQ16359 Length=2539 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134491 CTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGG 134550 |||| || |||| ||| ||||| || ||||| ||||| || |||||||||||| | || Sbjct 2539 CTCTCAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGG 2480 Query 134551 TGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 || || || || ||||| || || ||||| |||| ||| ||||| || || || |||| Sbjct 2479 TGCGACCATCTTCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGC 2420 Query 134611 CTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGA 134670 ||||||| || || || ||| ||| || || | |||||| | ||||| || | Sbjct 2419 CTTCTTTGTCCTGGATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCA 2360 Query 134671 GAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 | || || |||||||| || | || || || || || ||||| ||| Sbjct 2359 GGGTGATTGTTTTACCAGTCAGGGTCTTCACAAAGATCTGCATCTTG 2313 >seq1673 Length=142529 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 |||||||| | ||| |||| ||| ||||| || ||||| ||||| || ||||||||||| Sbjct 269 TTTCCTCCACGGAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 210 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | |||| | || || ||||| || || ||||| |||| | |||||| || || Sbjct 209 GACAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGA 150 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || ||||||||||| ||||| || ||| ||| || || | |||||| | ||| Sbjct 149 GGGATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTCTCAATGGTGTCGCTGGGCTCC 90 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || ||||| || || || | || || || || || ||||| Sbjct 89 ACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 40 >seq365 Length=500478 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || || || |||| || ||||| || ||||||||||| || ||||||||||| Sbjct 8932 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 8991 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| || ||||| ||||| || || ||||| | ||||||||| || || Sbjct 8992 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCTGGGGGA 9051 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||||||||| || || || || ||| || || | ||||| | || || Sbjct 9052 ATGCCTTCTTTGTCCTGGATCTTAGCTTTCACGTTCTCGATGGTGTCACTGGGCTCAACC 9111 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||||||||| || | || || ||||| || ||||| Sbjct 9112 TCCAGGGTGATGGTTTTACCAGTGAGTGTCTTGACGAAGATCTGCAT 9158 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || || || |||| ||| ||||| || ||||||||||| || ||||||||||| Sbjct 3807 CCACCCCTCAGACGCAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 3866 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||| ||||| | |||||| || || || Sbjct 3867 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 3926 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| || | ||||| | ||||| Sbjct 3927 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 3986 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| ||||| || | || || || || || ||||| Sbjct 3987 TCCAGGGTGATGGTCTTACCAGTGAGTGTCTTGACAAAGATCTGCAT 4033 Score = 100 bits (110), Expect = 3e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || || || |||| || ||||| || ||||||||||| || ||||||||||| Sbjct 9160 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 9219 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| || ||||| ||||| ||||| ||||| | |||||| || || || Sbjct 9220 AGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 9279 Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629 ||||||||||| || || || || Sbjct 9280 ATGCCTTCTTTGTCCTGGATCTT 9302 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/209 (70%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || |||||||| ||||| ||||||||||| | |||| | || || ||||| Sbjct 4118 TGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGC 4177 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || || || ||||| | |||||| || || || |||||||| || || || || || Sbjct 4178 TTTCCAGCGAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTG 4237 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||| || || | ||||| | || || ||||| || ||||||||||| || Sbjct 4238 GCTTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTG 4297 Query 134691 AAAGTTTTAACGAAAATTTGCAT-TTTGT 134718 | || || ||||| || ||||| ||||| Sbjct 4298 AGTGTCTTGACGAAGATCTGCATGTTTGT 4326 >seq49 Length=1117640 Score = 100 bits (110), Expect = 3e-16 Identities = 262/398 (66%), Gaps = 4/398 (1%) Strand=Plus/Plus Query 8542 TCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCC 8601 ||||||| ||||||||| || | || | || || || ||| | |||||||| || Sbjct 731983 TCGAACAAGCGCCACAGGCCGATCGGAATCGGAGTCCAGGGTTTAGCCGACGCCTTCATT 732042 Query 8602 ATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAA 8661 | |||| | ||| | ||||||| ||| || | |||||||||| | || ||| Sbjct 732043 CTCATGCGTCACCCGTTTGAAAGCCCAGAGGCTCAACTGCTCAACATCCACATCTTCGAA 732102 Query 8662 ACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGC--CCGAGAATTGGGCACGT 8719 || | || |||| ||| | || || ||||| | || || ||||| | ||| | | Sbjct 732103 ACCATTTACTACGCCGCTCTGGAGGCGAGCTGCGAGCTGGCGGCCGAGC--TCGGCCCCT 732160 Query 8720 ACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATG 8779 |||| |||||| |||| ||| | |||| || || |||| |||||||||||| | Sbjct 732161 ACGAGACGTACGAGGGCTCCCCGGTCAGCAAGGGCATCCTGCAGTACGACATGTGGGAGA 732220 Query 8780 TCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTT 8839 ||||| ||| | | ||| | |||| |||| ||||| || || || Sbjct 732221 AGACGCCGACCGATCTCTGGGACTGGAAGCTGCTGAAGGAGAAAATCGCCAAACATGGCG 732280 Query 8840 TGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAA 8899 || | || ||| || |||| |||||||| ||| | || || || || |||| | Sbjct 732281 TGAGGAACAGCCTGCTGCTGGCCCCGATGCCCACAGCCTCCACCGCCCAGATCCTGGGCA 732340 Query 8900 ACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTAC 8937 ||||||| ||| | || | | ||||| |||| | ||| Sbjct 732341 ACAACGAGTCCATCGAAGCCTACACCAGCAACATCTAC 732378 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291 |||||| || || | || | || || || | ||| |||||||||||||||||||| || Sbjct 731676 CGCCATCATTGAGTCGCAGACAGAGACTGGAACGCCATACATGCTGTACAAAGACGCCTG 731735 Query 8292 CAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGA 8351 |||| || ||||| || || |||||||||| |||||||| |||||| | || Sbjct 731736 CAACAGGAAGAGCAACCAGCAGAATCTGGGCACCATAAAGTGCAGCAACCTGTGCACCGA 731795 Query 8352 AATTGTACAGTACA 8365 |||||| | |||| Sbjct 731796 AATTGTTGAATACA 731809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505206260163280