Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq49 459 4e-124 seq56 109 8e-19 seq4 102 1e-16 >seq49 Length=1117640 Score = 459 bits (508), Expect = 4e-124 Identities = 1279/1947 (66%), Gaps = 29/1947 (1%) Strand=Plus/Minus Query 68653 TTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTA 68712 ||||| ||||| || ||||||| | ||||||||| | || | || ||||| || || Sbjct 732473 TTCTTCATCTCCTCGTTCCACAGTCCTCTCTCCGTCAGGTCTTTGAGCAGATGAGGGTTG 732414 Query 68713 ACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 68772 || || ||||| || || || | || || || ||||| || || ||||| || | ||| Sbjct 732413 ACGATCTGAAACTCTCCCGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCG 732354 Query 68773 ACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAAT 68832 | || || || || ||||| || || || || || || || ||||| || |||| || Sbjct 732353 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGCAGC 732294 Query 68833 AAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGA 68892 | || || || | |||||| | |||||| || || || | ||||| ||||| ||| Sbjct 732293 AGGCTGTTCCTCACGCCATGTTTGGCGATTTTCTCCTTCAGCAGCTTCCAGTCCCAGAGA 732234 Query 68893 TCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCA 68952 || | || | ||| | ||||| || || || || || || | || || Sbjct 732233 TCGGTCGGCGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACCGGGGAGCCC 732174 Query 68953 TTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCG 69012 | || || || || || || || | || || || || || ||||| | || || Sbjct 732173 TCGTACGTCTCGTAGGGGCCGAGCTCGGCCGCCAGCTCGCAGCTCGCCTCCAGAGCGGCG 732114 Query 69013 TAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGA 69072 || ||||| |||||||| || | | ||||| ||| || ||| | || || || || Sbjct 732113 TAGTAAATGGTTTCGAAGATGTGGATGTTGAGCAGTTGAGCCTCTGGGCTTTCAAACGGG 732054 Query 69073 TAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGT 69132 | | | | ||||| || || || || || ||||| || || || ||||| || || || Sbjct 732053 TGACGCATGAGAATGAAGGCGTCGGCTAAACCCTGGACTCCGATTCCGATCGGCCTGTGG 731994 Query 69133 CTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTA 69192 | ||| || || | || ||||| || | || || || || || || ||||| || || Sbjct 731993 CGCTTGTTCGAGTTCTCGGCTTCCGGTACCGGGTAGTAGTTGATCTCGATAATCTTGTTC 731934 Query 69193 AGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCA-TC 69251 || ||| ||| | |||||| ||| | ||||| ||||||||| |||| || Sbjct 731933 AGGTTTTTGACGATTACTTTGGTCACATATGCCAGTTTCTTAAAATCAAAA-GTCCGCTC 731875 Query 69252 TA---TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGA 69308 | | || |||| || || || | || || || ||||| || |||||||| | Sbjct 731874 TGGGGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTACAGACCGCTACCTCGTCCTT 731815 Query 69309 ATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTG 69368 | | |||| | || || || || || || || || || || || |||||||| || Sbjct 731814 GCTGGTGTATTCAACAATTTCGGTGCACAGGTTGCTGCACTTTATGGTGCCCAGATTCTG 731755 Query 69369 CTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAAT 69428 ||| || ||||| |||| |||||||| ||||| || || | || || ||||| || | Sbjct 731754 CTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTATGGCGTTCCAGTCTCTGT 731695 Query 69429 CTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTT 69488 ||| || || || || | | ||| | | ||| || | || |||| ||| Sbjct 731694 CTGCGACTCAATGATGGCGTACCACAGCTGCTGAGCCTTCACCACACGCTTGGC---CTT 731638 Query 69489 ---CTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAA 69545 ||| || ||||| || || ||| || || || || ||||| ||||||| Sbjct 731637 GCCCTCCTTCTCATACCTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCATCCAG 731578 Query 69546 TCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCAT 69605 ||||| || | || |||||||||| ||||| | | | || |||| ||||| Sbjct 731577 ACCAGGGCAGGCGTTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACTCTCTTCAT 731518 Query 69606 AAATAGATCGGGAATCCAAAGAGC-TATAAAGAGATCTCTGGTTCTATTTTCTTCATTTC 69664 || ||||| || ||||| | || || ||| || ||||||| || | || || |||| Sbjct 731517 GAACAGATCAGGGATCCACATGGCGTAGAAA-AGGTCTCTGGCCCTCTGCTCCTCCTTTC 731459 Query 69665 CTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 69724 |||| || || || || || || || || | | ||| | ||||| || ||||| || | Sbjct 731458 CTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCAAAGTGCCAGGGCTCTAGGTACA 731399 Query 69725 TCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTAT 69784 | || | | |||| |||| || || || ||||| || | ||| | || ||||| || | Sbjct 731398 TGGCGAAGGCTCCGGGTCTCTTGTTGCCCCCCTGGTCGACGTAGCGTGCCGTGTTGTTGT 731339 Query 69785 AGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTC 69844 | ||||||||||| || | | || || || || || || || ||||| || || || | Sbjct 731338 AAACTCTCAGCATGGGGACGAGCCCGTTGGAGTTTCCGTTGGTGCCAGAGATGTAGCTCC 731279 Query 69845 CTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAG 69904 || | | | || || | | | ||| || ||||| || || ||||| || | Sbjct 731278 CTGTAGATCTGATGCAGCTGACCGCCACACCGATGCCTCCAGCTGACTTGGAGATGAGGG 731219 Query 69905 CACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAA 69964 |||| | |||| ||||| || || || || ||||| || || ||||| || || | Sbjct 731218 CACACTGCTTCAGCGTGTCGTAGATGCCTTCAATGCTGTCGTCCTTCATGGCGAGCAGGA 731159 Query 69965 AACAGCTAGACATTTGATG-ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGA 70023 | ||||| |||| ||| | ||| | || || || || || | || || || ||||| Sbjct 731158 AGCAGCTGGACAGCTGAGGCCTGT-TGGTCCCAGCGTTGAAGAGAGTCGGGGAGGCGTGG 731100 Query 70024 GTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGA 70083 |||||||| || || || ||||| ||||| || ||||| |||| || |||||| || Sbjct 731099 GTGAACCACTTCTCTGACAGCAGGTTGTAGGTCTCAATCGCTGCATCGATATCCGTCTTG 731040 Query 70084 TGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTT 70143 || ||||||| | ||| | ||| | ||| ||||| ||||| || || ||| || Sbjct 731039 TGGATTCCTACAGAGACTCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTG 730980 Query 70144 ATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCT 70203 || |||| |||||| || |||||||| || || || || ||||||| || || ||| Sbjct 730979 ATCTTCAGCAGGTACGAACGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTAGGAGAAATCT 730920 Query 70204 CTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACA 70263 | ||||| || || || || ||| || || | || ||| || || || Sbjct 730919 CGGTCGTAGATTATGGACGAGTTGAGTCGGTCTTTGTTTTCTAGAACGATGTC---AAGC 730863 Query 70264 GT---AGGTGAGATAATCGGAGA---TCGTTTACCATTTTTAGGATTAACATAGTTGAAT 70317 || ||||| || || || ||||| || || || | |||||| | Sbjct 730862 GTCTCCTTGGAGATCATAGGTGAGTGGCGTTT---GTTCAGGGGGTTGATGTAGTTGTAC 730806 Query 70318 AAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCT 70377 | || ||||| || || || || | ||| || || || ||||| | || || | ||| Sbjct 730805 AGGTCCTCCATCACGTCGCTGAACACTTTCTTAGTCTCTTTGTGCAGGTTGGAGACGGCG 730746 Query 70378 ATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCC 70437 || | || || || || || ||||| || |||| || || || || || || || Sbjct 730745 ATCCGAGCAGCGAGGATGGCGTAGTCGGGGTGTTTAGTTGTGAGCGTGGCAGCGATCTCT 730686 Query 70438 GCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTC 70497 || || | ||| || | || | ||| || |||||| | || || || || || || ||| Sbjct 730685 GCTGCCAGCGTGTCGAGCTCCACAGTGGTGACTCCGCTGTACAGACCCTGGATCACCTTC 730626 Query 70498 ATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCT-AAT 70556 |||| || | | || || | || || | |||||| || || || || |||| || Sbjct 730625 ATGGTGATCTGGGCCGGGTCCACAAAGTCAGAGTTCAGCCCGTAGCA-AAGCTTCTGGAT 730567 Query 70557 ACGAGATGTAATTTTATCAAACATAAC 70583 ||||| || ||||| || ||||| || Sbjct 730566 GCGAGAGGTGATTTTGTCGAACATGAC 730540 >seq56 Length=1093683 Score = 109 bits (120), Expect = 8e-19 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 69316 TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTA 69375 |||| || |||||||| || || || ||| ||||||| || |||||||||||||| || Sbjct 335794 TATTCTACGATCTCTGTGCACAGGTTGCTAGATTTGATGGTGCCCAGATTTTGCTGGTTG 335853 Query 69376 CTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGAT 69435 ||||| |||| |||||||||||||| || || |||| || || ||||| |||| || Sbjct 335854 CTCTTCCTGTTGCAGGCGTCCTTGTACAGCATGTACGGTGTCCCGGTTTCTGTCTGTGAC 335913 Query 69436 TCGATAAT 69443 ||||| || Sbjct 335914 TCGATGAT 335921 Score = 104 bits (114), Expect = 3e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 68956 TATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAA 69015 || ||||||||||| || ||| | || ||||||||||| ||||| | || |||| Sbjct 335228 TAGGTTTCATAAGGGCCGACCTCAGCTGCCAGTTCACAACTGGCCTCCAGAGCGGCGTAG 335287 Query 69016 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAA 69075 || || || || || |||| | ||||| || || ||| | || || ||||||||| Sbjct 335288 TAGATGGTCTCAAAGATCTGAATGTTGAGTAACTGGGCCTCTGGGCTTTCAAATGGATAA 335347 Query 69076 TGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTC 69135 | | ||| || || ||||| |||| |||||| || || || || || || || || | | Sbjct 335348 CGCATAAGGATGAAGGCATCAGCCAGTCCCTGCACACCGATTCCAATTGGCCTGTGACGC 335407 Query 69136 TTATTTGAACTTTCAGC 69152 || || ||| ||||||| Sbjct 335408 TTGTTAGAATTTTCAGC 335424 Score = 89.7 bits (98), Expect = 7e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500 |||| || ||||| ||||| || || |||||| ||| |||| || || ||||| |||| Sbjct 334328 TCCAACCATAGAAGTGCATGCTGGTCAGTTTGCCATAGTTTGGCTCAGCAATATGGATAT 334387 Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560 | | || || || || || ||| | || || | |||||||||||| || | || ||| Sbjct 334388 TTAGAGACTGGCTCTGGTCAATGTAGGCACCGCGATCTGCCGCCATCTTGAGAACTGTCT 334447 Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGG 68609 | || | |||||||| | || ||| | | ||| || | |||||| || Sbjct 334448 TCTGGGAGATTTCCCAGACTGTTTTATACAACTGCTTCAGATCATCGGG 334496 >seq4 Length=2013838 Score = 102 bits (112), Expect = 1e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 ||||||| || ||||| | ||| || || | || || |||||||| | || | ||| | Sbjct 553679 CCTCATCCCTGCTAATCAGTTCATTGGAGTAAGTAAGACCAGGCATCAAGCCTCTCTTCT 553620 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 | | |||| | ||||||||||| || ||||| ||||||||||| || || |||||||| | Sbjct 553619 TTAACCAATAGATGGCAGCAAATGAGCCAGAGAAGAAGATGCCCTCCACAGCTGCAAAAG 553560 Query 39759 CAACAAGTCTCTCTCC 39774 | |||| || ||| || Sbjct 553559 CCACAATTCGCTCACC 553544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686647654446960