Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 8e-12 >seq4 Length=2013838 Score = 86.0 bits (94), Expect = 8e-12 Identities = 96/123 (78%), Gaps = 4/123 (3%) Strand=Plus/Minus Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAG-AAGCATAGACCTGGCATGAGACCCCGCTTC 122736 ||||||| | | ||| |||||||| ||| ||| | ||||| ||||| | || | |||| Sbjct 553679 CCTCATCCCTGCTAATCAGTTCATTGGAGTAAGTA-AGACCAGGCATCAAGCCTCTCTTC 553621 Query 122737 TTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795 || |||||||| || || ||| ||||| || ||||||||||| ||||||||| ||||| Sbjct 553620 TTTAACCAATAGATGGCAGCA-AATGAGCCAGAGAAGAAGATGCCCTCCACAGCTGCAAA 553562 Query 122796 CGC 122798 || Sbjct 553561 AGC 553559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627793237934400