Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq49 176 6e-39 seq277 91.5 2e-13 seq4 82.4 9e-11 >seq49 Length=1117640 Score = 176 bits (194), Expect = 6e-39 Identities = 859/1335 (64%), Gaps = 44/1335 (3%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||| | || | | |||| ||||| |||| ||| ||||| |||||| Sbjct 732377 TAGATGTTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 732318 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 ||||||||||| || |||| || |||||||| | | || | || || ||| Sbjct 732317 GCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATTTTCTCC 732258 Query 118302 TTGAG-AGCGTCCCAGTCGTAGTTGAGCTTT-GTCTCCCCCTGCCACATATCAAACTGGA 118359 || || ||| ||| |||| || || | | | | | || |||||| || |||| | Sbjct 732257 TTCAGCAGCTTCC-AGTCCCAGA-GATCGGTCGGCGTCTTCTCCCACATGTCGTACTGCA 732200 Query 118360 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 118419 |||| || | | | || || ||||| | ||||| || ||||| | |||||| Sbjct 732199 GGATGCCCTTGCTGACCGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAGCTCGGCCGCCA 732140 Query 118420 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTG 118479 ||| |||||||||| || || |||| || || ||||| || ||| | || | | Sbjct 732139 GCTCGCAGCTCGCCTCCAGAGCGGCGTAGTAAATGGTTTCGAAGATGTGGATGTTGA--G 732082 Query 118480 CC-TTG-GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACC 118537 | ||| ||||| | ||||||| | | || | ||| || | || || | ||| Sbjct 732081 CAGTTGAGCCTCTGGGCTTTCAAACGGGTGACGCATGAGAATGAAGGCGTCGGCTAAACC 732022 Query 118538 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---AC 118594 ||||| |||| || || || | || | | | || || ||| ||| ||| || Sbjct 732021 CTGGACTCCGATTCCGATCGGCCTGTGGCGCTTGTTCGAGTTCT---CGGCTTCCGGTAC 731965 Query 118595 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 118654 || || | || | ||||||| | | || || |||||| || || || || | | Sbjct 731964 CGGGTAGTAGTTGATCTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTCACAT- 731906 Query 118655 ATGA-AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGA 118713 ||| || || | |||||||| | || |||| |||| ||| | ||||||| Sbjct 731905 ATGCCAGTTTCTTAAAATCAAAAGTCCG---CTCTGGGGTGACGTACATGTTGAGGGCGA 731849 Query 118714 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGC 118773 | || ||||| ||||| || | ||| ||||| ||||| || | |||||| |||| Sbjct 731848 TGGAGGCCAGGTTACAGACCGCTACCTCGTCCTTGCTGGTGTATTCAACAATTTCGGTGC 731789 Query 118774 ACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 118833 ||| ||| | ||| |||||||||| |||| || || ||| |||| || || | Sbjct 731788 ACAGGTTGCTGCACTTTATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGT 731729 Query 118834 CCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA 118893 | ||||| |||||||||||||| || ||||| || || |||| | || || | || | Sbjct 731728 CTTTGTACAGCATGTATGGCGTTCCAGTCTCTGTCTGCGACTCAATGATGGCGTACC--A 731671 Query 118894 CATCGGC--AGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGA 118950 || | || ||| || || || ||||| ||||| | ||| ||| | ||||||| Sbjct 731670 CAGCTGCTGAGCCTTCACCACACGC-TTGGCCTTGCCCTCCTTCTCATACCTGGTGTAGA 731612 Query 118951 GGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAG 119009 | |||||||| || ||| | ||| || || || || |||| || | Sbjct 731611 GCTTCTCAAACTCCTCCCCCCAGCACTCATCCAGACCAGG-GCAGGCGTTGGGACACATC 731553 Query 119010 AGAGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 119067 |||||||| | || | ||| || | ||||||||| || || |||||||| | | Sbjct 731552 AGAGACCA--GTCCTGGTTGCTCTCCACTCTCTTCATGAACAGATCAGGGATCCACATGG 731495 Query 119068 CCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 119126 | |||| || || | | | ||| || | | || || || || ||||| Sbjct 731494 CGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAGG 731436 Query 119127 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACG 119182 ||||| | | || |||||| || || ||||||| |||| | || || | Sbjct 731435 AAGTCGAACACGTCAAAGTGCCAGGGCTCTAGGTACATGGCGAAGGCTCCGGGTCTCTTG 731376 Query 119183 ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGAT 119242 | || |||||| || || | || ||| ||| | || | ||||| || | || Sbjct 731375 TTG-CCCCCCTGGTCGACGTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAG 731317 Query 119243 ACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTG--GCTCTGACATCGTGG 119300 || | ||| | || || || || | | | || || | ||||| | | Sbjct 731316 CCCGTTGGAGTTTCCGTTGGT--GCCAGAGATGTAGCTCCCTGTAGATCTGATGCAGCTG 731259 Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360 | || ||| || || || || |||| ||||| | || |||| | | || || || Sbjct 731258 ACCGCCACACCGATGCCTCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCG 731199 Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420 ||||| || || || ||| |||| | |||| ||||||||||| |||| |||||| Sbjct 731198 TAGATGCCTTCAATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGAGGC 731139 Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACAT 119479 ||| || ||||||||||||||||| || | |||||| ||||| || | | |||| Sbjct 731138 CTGTTGGTCCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAAC-CACTTCTCTGACAG 731080 Query 119480 CTTGTCGTAGGTCTC 119494 | || ||||||||| Sbjct 731079 CAGGTTGTAGGTCTC 731065 >seq277 Length=566994 Score = 91.5 bits (100), Expect = 2e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 ||||||| | | |||||| || || |||||| ||| || ||||| || || | ||||| Sbjct 257392 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 257333 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154 ||| |||||| || ||| || || |||||||||||||| |||||||| ||||| | Sbjct 257332 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGG 257273 Query 130155 CAAAGAGACGCTC 130167 | | | |||||| Sbjct 257272 CCACAACACGCTC 257260 Score = 91.5 bits (100), Expect = 2e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 ||||||| | | |||||| || || |||||| ||| || ||||| || || | ||||| Sbjct 272204 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 272263 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154 ||| |||||| || ||| || || |||||||||||||| |||||||| ||||| | Sbjct 272264 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGG 272323 Query 130155 CAAAGAGACGCTC 130167 | | | |||||| Sbjct 272324 CCACAACACGCTC 272336 >seq4 Length=2013838 Score = 82.4 bits (90), Expect = 9e-11 Identities = 78/97 (80%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 130049 ATGAGTTCATTCGAG-AAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAAT 130107 || |||||||| ||| ||| | ||||| ||||| | || | |||||| ||||| | || Sbjct 553665 ATCAGTTCATTGGAGTAAGTA-AGACCAGGCATCAAGCCTCTCTTCTTTAACCAATAGAT 553607 Query 130108 CGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 130144 ||| ||||||||||||||||||||| ||||||||| Sbjct 553606 GGCAGCAAATGAGCCAGAGAAGAAGATGCCCTCCACA 553570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618200086397840