Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq49 221 1e-52 seq277 89.7 6e-13 >seq49 Length=1117640 Score = 221 bits (244), Expect = 1e-52 Identities = 904/1404 (64%), Gaps = 52/1404 (4%) Strand=Plus/Plus Query 104314 GTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAG 104373 ||||| ||||| | || || |||||||| ||||| || || || || ||||||| Sbjct 731094 GTTCACCCACGCCTCCCCGACTCTCTTCAACGCTGGGACCAACAGGCCTCAGCTGTCCAG 731153 Query 104374 TTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGA 104433 |||||||| |||||| ||||| ||| || | || ||||| | || || | | | Sbjct 731154 CTGCTTCCTGCTCGCCATGAAGGACGACAGCATTGAAGGCATCTACGACACGCTGAAGCA 731213 Query 104434 GTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATG-----CACATCCAT--GATG 104486 |||||| | ||||| |||| ||||| || || || || || | ||| ||| Sbjct 731214 GTGTGCCCTCATCTCCAAGTCAGCTGGAGGCATCGGTGTGGCGGTCAGCTGCATCAGATC 731273 Query 104487 T---GAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTC 104543 | | |||| || ||||| || || || || | || | || | | | Sbjct 731274 TACAGGGAGC---TACATCTCT-------GGCACCAACGGAAACTCCAACGGGCTCGTCC 731323 Query 104544 CAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG- 104602 | ||||| | || | ||| ||| || ||||| || | || | |||| | | || Sbjct 731324 CCATGCTGAGAGTTTACAACAACACGGCACGCTACGTCGACCAGGG-GGGCAACAAGAGA 731382 Query 104603 ---GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAG 104659 ||| | |||| | || || ||||| |||||| || | | || ||||| ||| Sbjct 731383 CCCGGAGCCTTCGCCATGTACCTAGAGCCCTGGCACTTTGACGTGTTCGACTTCCTGGAG 731442 Query 104660 TTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGG 104719 || ||| ||| | |||||| | || | | || || |||| ||| | ||| Sbjct 731443 CTGAAGAAGAACACAGGAAAGGAGGAGCAGAGGGCCAGAGACCTTTTCTACGCCATGTGG 731502 Query 104720 ATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT---TGGTCTCTCTTTTGT 104776 || || ||||| |||||||||||||| |||||| | | |||||||| | ||| Sbjct 731503 ATCCCTGATCTGTTCATGAAGAGAGT---GGAGAGCAACCAGGACTGGTCTCTGATGTGT 731559 Query 104777 CCAGACAAGGCA---CCTGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTTTA 104832 || ||| || |||||||| || ||| | ||| ||||||||||| || || Sbjct 731560 CC---CAACGCCTGCCCTGGTCTGGATGAGTGCTGGGGG-GAGGAGTTTGAGAAGCTCTA 731615 Query 104833 CACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGA 104891 ||| | ||| ||| | || || ||| | ||| |||| ||| | ||||| Sbjct 731616 CACCAGGTATGAGAAGGAGGGCAAGGCCAA-GCGTGTGGTGAAGGCTCAGCAGCTGTGGT 731674 Query 104892 AAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCT 104951 | || || | |||| || || |||||||| || ||||||||||| ||||||||||||| Sbjct 731675 ACGCCATCATTGAGTCGCAGACAGAGACTGGAACGCCATACATGCTGTACAAAGACGCCT 731734 Query 104952 GTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAG 105011 | ||| ||||| || || ||||| |||| || ||| | ||| || || || | Sbjct 731735 GCAACAGGAAGAGCAACCAGCAGAATCTGGGCACCATAAAGTGCAGCAACCTGTGCACCG 731794 Query 105012 AAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTC 105071 |||| | |||| || ||| || ||| || || |||||||| || || ||||| | Sbjct 731795 AAATTGTTGAATACACCAGCAAGGACGAGGTAGCGGTCTGTAACCTGGCCTCCATCGCCC 731854 Query 105072 TCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTA 105131 || || ||| || |||||| ||| ||||||| | | ||||| | || | Sbjct 731855 TCAACATGTACGTCACCCCAGAG---CGGACTTTTGATTTTAAGAAACTGGCATATGTGA 731911 Query 105132 CGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGA 105191 | ||| || ||||||||| |||| |||| || | || | ||||| || | Sbjct 731912 CCAAAGTAATCGTCAAAAACCTGAACAAGATTATCGAGATCAACTACTACCCGGTACCGG 731971 Query 105192 CTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGG 105251 || || || || | | | ||| | || || || |||| || |||||| | || | Sbjct 731972 AAGCCGAGAACTCGAACAAGCGCCACAGGCCGATCGGAATCGGAGTCCAGGGTTTAGCCG 732031 Query 105252 ATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGC 105311 | | |||||||| || ||| | ||||| | || || | |||| | Sbjct 732032 ACGCCTTCATTCTCATGCGTCACCCGTTTGAAAGCCCAGAGGCTCAACTGCTCAACATCC 732091 Query 105312 GCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTG 105371 ||| || || ||||| || |||||||||| |||||||| | ||| |||| | | Sbjct 732092 ACATCTTCGAAACCATTTACTACGCCGCTCTGGAGGCGAGCTGCGAGCTGGCGGCCGAGC 732151 Query 105372 ATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGG-GTGCTTCAATTTGA 105429 || || || || || | ||||| || || | ||| |||||| | || || | || Sbjct 732152 TCGGCCCCTACGAGACGTACGAGGGCTCCCCGG--TCAGCAAGGGCATCCTGCAGTACGA 732209 Query 105430 TATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGAAGCT-CTCAAGGAACGCATC 105487 ||||||| || || || | | || || |||| ||||||| || ||||| ||| Sbjct 732210 CATGTGGG-AGAAGACGCCGACCGATCTCTGGGACT-GGAAGCTGCTGAAGGAGAAAATC 732267 Query 105488 AAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCA 105547 | | || | | ||||| || || |||| || ||||| |||||||||||||| Sbjct 732268 GCCAAACATGGCGTGAGGAACAGCCTGCTGCTGGCCCCGATGCCCACAGCCTCCACCGCC 732327 Query 105548 CAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGA 105607 || ||| |||| || || || | | | ||| ||||||| | |||||||| | || Sbjct 732328 CAGATCCTGGGCAACAACGAGTCCATCGAAGCCTACACCAGCAACATCTACACCCGCAGG 732387 Query 105608 ACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATT 105667 || ||||||||||| ||| |||||| ||||| | | ||||| | |||| Sbjct 732388 GTTCTGTCGGGAGAGTTTCAGATCGTCAACCCTCATCTGCTCAAAGACCTGACGGAGAGA 732447 Query 105668 GGTCTCTGGTCCAAGGATATGAAG 105691 || || ||| | |||| |||||| Sbjct 732448 GGACTGTGGAACGAGGAGATGAAG 732471 >seq277 Length=566994 Score = 89.7 bits (98), Expect = 6e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887 || ||||| ||||||||||||||||||||| || || | ||||| |||||| |||| Sbjct 257284 GTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGCTGAAGAAGAGAGGC 257343 Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 94936 || ||||| || || ||||||||||||||| ||| | ||||||| Sbjct 257344 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGG 257392 Score = 89.7 bits (98), Expect = 6e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887 || ||||| ||||||||||||||||||||| || || | ||||| |||||| |||| Sbjct 272312 GTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGCTGAAGAAGAGAGGC 272253 Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 94936 || ||||| || || ||||||||||||||| ||| | ||||||| Sbjct 272252 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGG 272204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583039058825360