Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq49 192 6e-44 seq4 89.7 6e-13 >seq49 Length=1117640 Score = 192 bits (212), Expect = 6e-44 Identities = 467/701 (67%), Gaps = 10/701 (1%) Strand=Plus/Plus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 |||| || || |||||| | || || || ||||||||||| || || |||||| || Sbjct 731089 AAGTGGTTCACCCACGCCTCCCCGACTCTCTTCAACGCTGGGACCAACAGGCCTCAGCTG 731148 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 || |||||||||||| | || |||||||| ||| || || ||||||||||| ||||| Sbjct 731149 TCCAGCTGCTTCCTGCTCGCCATGAAGGACGACAGCATTGAAGGCATCTACGACACGCTG 731208 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT---CCACTGCTCGAAC 53443 ||| ||||||||| ||||||||||| | || || |||||| | | ||| | Sbjct 731209 AAGCAGTGTGCCCTCATCTCCAAGTCAGCTGGAGGCATCGGTGTGGCGGTCAGCT---GC 731265 Query 53444 GTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCT 53503 || | | | || | ||| || || ||||| | || | || |||| || Sbjct 731266 ATCAGATCTACAGGGAGCTACATCTCTGGCACCAACGGAAACTCCAACGGGCTCGTCCCC 731325 Query 53504 ATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAG 53563 ||||| | || | |||||||||||| || |||||| ||||||| || ||| | Sbjct 731326 ATGCTGAGAGTTTACAACAACACGGCACGCTACGTCGACCAGGGGGGCAACAAGAGACCC 731385 Query 53564 GGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTG 53623 || | |||||||| ||||| ||||| |||||| ||| | | || || || |||||| Sbjct 731386 GGAGCCTTCGCCATGTACCTAGAGCCCTGGCACTTTGACGTGTTCGACTTCCTGGAGCTG 731445 Query 53624 CGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTGGAT 53682 ||| || | || ||| | | | | ||||| || ||| || ||||||| Sbjct 731446 AAGAAGAACACAGGAAAGGAGGAGCAGAGGGCCAGAGACCTTTTCTAC-GCCATGTGGAT 731504 Query 53683 TCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAA 53742 || || || |||||| | | ||||||| || |||| |||| |||||||| || || Sbjct 731505 CCCTGATCTGTTCATGAAGAGAGTGGAGAGCAACCAGGACTGGTCTCTGATGTGTCCCAA 731564 Query 53743 CGAGTGCCCCGGCCTCCA-GGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGT 53801 || ||||| || || | | ||| || || ||||||||| | || | || | || Sbjct 731565 CGCCTGCCCTGGTCTGGATGAGTG-CTGGGGGGAGGAGTTTGAGAAGCTCTACACCAGGT 731623 Query 53802 ACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCC 53861 | | ||||| |||| ||| ||||| | || | ||| | || ||| Sbjct 731624 ATGAGAAGGAGGGCAAGGCCAAGCGTGTGGTGAAGGCTCAGCAGCTGTGGTACGCCATCA 731683 Query 53862 TCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGA 53921 | || ||| ||||| |||||||| |||||| ||||| || | |||| || Sbjct 731684 TTGAGTCGCAGACAGAGACTGGAACGCCATACATGCTGTACAAAGACGCCTGCAACAGGA 731743 Query 53922 AGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGCAAC 53962 ||||||||||| |||| | ||| ||| || | |||||| Sbjct 731744 AGAGCAACCAGCAGAATCTGGGCACCATAAAGTGCAGCAAC 731784 >seq4 Length=2013838 Score = 89.7 bits (98), Expect = 6e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831 ||||| ||||| |||| |||||| || | | ||| |||||||| | || | |||||| Sbjct 553677 TCATCCCTGCTAATCAGTTCATTGGAGTAAGTAAGACCAGGCATCAAGCCTCTCTTCTTT 553618 Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891 |||||| |||||||| || || ||| |||||||||||| || ||| ||||| || Sbjct 553617 AACCAATAGATGGCAGCAAATGAGCCAGAGAAGAAGATGCCCTCCACAGCTGCAAAAGCC 553558 Query 74892 ACAA 74895 |||| Sbjct 553557 ACAA 553554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547007962157200