Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1673 118 9e-22 SEQ16359 111 1e-19 seq365 105 6e-18 >seq1673 Length=142529 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || || || |||||| | || || || || ||||| || Sbjct 39 CATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 98 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | ||||||| || ||| ||| || ||||||||||||||||| || || || || Sbjct 99 CGACACCATTGAGAATGTGAAAGCAAAGATCCAAGACAAAGAAGGCATCCCTCCTGACCA 158 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | || || || || ||||||| | ||| | || || ||||| Sbjct 159 GCAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 218 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| || |||||||| ||| | || |||| ||||| | || || || Sbjct 219 CATCCAGAAGGAGTCCACCCTCCACCTGGTGCTGCGTCTCCGTGGAGG 266 >SEQ16359 Length=2539 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||| || || | || || || || ||||| || | Sbjct 2317 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAAACAATCACCCTGGAGGTGGAGCCCAGC 2376 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || ||| ||| || || |||||||||||||| || || || || Sbjct 2377 GACACCATCGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGCATCCCTCCTGACCAG 2436 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | || || || || | ||||| || ||| | ||||| |||||| Sbjct 2437 CAACGTCTGATCTTTGCTGGTAAGCAGCTAGAAGATGGTCGCACCCTCTCCGACTACAAC 2496 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTG 27206 || || |||||||| ||| | || |||| ||||| || Sbjct 2497 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTGCGTCTG 2535 >seq365 Length=500478 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || || || | || || || || || || || Sbjct 9159 CATGCAGATCTTCGTCAAGACACTCACTGGTAAAACCATCACCCTGGAGGTTGAGCCCAG 9100 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || |||| || ||| || || || |||||||||||||| || || ||||| Sbjct 9099 TGACACCATCGAGAACGTGAAAGCTAAGATCCAGGACAAAGAAGGCATTCCCCCAGATCA 9040 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | ||| ||||| || |||| ||| | ||| | || || ||||| Sbjct 9039 GCAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACCCTCTCTGACTACAA 8980 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || ||||| || ||| | || | || ||||| || |||||||||| Sbjct 8979 CATCCAGAAGGAATCCACCCTCCACCTTGTCCTGCGTCTGAGGGGTGGCAT 8929 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| ||||| || || |||||| | || || || || ||||| || Sbjct 9813 CATGCAGATCTTTGTGAAAACCCTTACTGGCAAGACCATCACCCTAGAGGTGGAGCCCAG 9754 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||||| ||||| ||||| || |||||||||||||| || || || || Sbjct 9753 TGACACCATTGAGAATGTCAAGGCTAAAATCCAGGACAAAGAAGGCATTCCCCCAGACCA 9694 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 ||| | || || | ||| ||||| || ||||||| Sbjct 9693 GCAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAAGA 9658 Score = 89.7 bits (98), Expect = 4e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 || || || || || || || |||| | || |||| ||||| || || || ||| Sbjct 9350 ATCACCCTGGAGGTTGAGCCCAGCGACACCATCGAGAATGTCAAGGCTAAGATCCAGGAC 9291 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 ||||||||||| || || || || ||| | || || | || ||||| || |||||||| Sbjct 9290 AAAGAAGGCATTCCCCCTGACCAGCAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGAC 9231 Query 27144 AGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 | ||| | || || |||||||| || ||||| || ||| | || | || ||||| Sbjct 9230 GGCCGCACCCTCTCTGACTACAACATCCAGAAGGAATCCACCCTCCACCTTGTCCTGCGT 9171 Query 27204 TTGCGGGGTGGCAT 27217 || |||||||||| Sbjct 9170 CTGAGGGGTGGCAT 9157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434753054897280