Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq251 131 2e-25 >seq251 Length=594084 Score = 131 bits (144), Expect = 2e-25 Identities = 104/125 (83%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 ||||| || |||||||||||||||||||| || || ||||| |||| |||||||||||| Sbjct 587603 TACTCTGCACCAAAGTGTCTCCACTGGAAGCCATACACCGGTCCCAGGTCGCCCTCCTCT 587662 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 || || ||| ||| | |||||||| ||||| || ||||||| || |||||||||||| Sbjct 587663 CGCTCTGTGAAGCCCAGATTGTCCAGGAAGTCCCGGGACCCGTTGGCATCCCAGATCTTC 587722 Query 7019 ACCCC 7023 ||||| Sbjct 587723 ACCCC 587727 Score = 131 bits (144), Expect = 2e-25 Identities = 104/125 (83%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381 ||||||||||||||||| || ||||||| || ||||| |||||||| | ||| ||| || Sbjct 587727 GGGGTGAAGATCTGGGATGCCAACGGGTCCCGGGACTTCCTGGACAATCTGGGCTTCACA 587668 Query 34382 TCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCG 34441 || |||||||||||| |||| ||||| || || |||||||||||||||||||| || Sbjct 587667 GAGCGAGAGGAGGGCGACCTGGGACCGGTGTATGGCTTCCAGTGGAGACACTTTGGTGCA 587608 Query 34442 GAGTA 34446 ||||| Sbjct 587607 GAGTA 587603 Score = 120 bits (132), Expect = 3e-22 Identities = 123/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| || || || ||||| || || |||||||| || || || | ||| Sbjct 586434 TGTGCGATCATGTAGGTCAGAAGTGCGTAGCTGGCGATGTTGAAAGGAACTCCCAGACCC 586493 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 || || || || || || || ||||| ||||||||||| |||| ||||||||| || Sbjct 586494 ATATCACCTGAGCGCTGGTACAGCTGACAGGACAGCTCACCATCACAGACGTAGAACTGA 586553 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||||| |||||| || || || ||||| || || || || Sbjct 586554 CAGAGGGCGTGGCAGGGAGGCAGAGCCATGAGGGGCAGGTC 586594 Score = 120 bits (132), Expect = 3e-22 Identities = 123/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 || || || || ||||| || || || |||||| ||||||| || ||||||||| || Sbjct 586594 GACCTGCCCCTCATGGCTCTGCCTCCCTGCCACGCCCTCTGTCAGTTCTACGTCTGTGAT 586535 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||||||||||| ||||| || || || || || || ||||| | || || || ||| Sbjct 586534 GGTGAGCTGTCCTGTCAGCTGTACCAGCGCTCAGGTGATATGGGTCTGGGAGTTCCTTTC 586475 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| || || || ||||||||||| || Sbjct 586474 AACATCGCCAGCTACGCACTTCTGACCTACATGATCGCACA 586434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448091981842080