Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq251 95.1 1e-14 seq738 82.4 6e-11 >seq251 Length=594084 Score = 95.1 bits (104), Expect = 1e-14 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || ||||| | ||| || |||||||| |||| | ||||||||| | || |||||| Sbjct 586422 AGTCCTGTAATGTGTGCGATCATGTAGGTCAGAAGTGCGTAGCTGGCGATGTTGAAAGGA 586481 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 || ||||||||||| || |||| | |||||||| || || || ||||| || | Sbjct 586482 ACTCCCAGACCCATATCACCTGAGCGCTGGTACAGCTGACAGGACAGCTCACCATCACAG 586541 Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATG 118695 || || ||||||| | | ||| || ||||||||| ||||| Sbjct 586542 ACGTAGAACTGACAGAGGGCGTGGCAGGGAGGCAGAGCCATG 586583 >seq738 Length=479450 Score = 82.4 bits (90), Expect = 6e-11 Identities = 78/97 (80%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 2263 AAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAA-AGCAG 2321 || |||||||| || |||||||| || |||||||||||||| | ||||| || | ||| Sbjct 287149 AAGCAGAATGTGGTGATTATGGGCAGGAAGACATGGTTTTC-CATCCCAGAGAAGAACAG 287091 Query 2322 GCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGA 2358 ||||||||||||||||| || | ||||| || ||| Sbjct 287090 ACCTTTGAACAACAGAATCAACATCGTTCTTAGCAGA 287054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414323165625496