Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq365 178 3e-39 SEQ16359 172 1e-37 seq1673 167 5e-36 seq510 125 2e-23 >seq365 Length=500478 Score = 178 bits (196), Expect = 3e-39 Identities = 163/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || || ||||| |||||||||||||| || || | ||||| | ||||||||||||||| Sbjct 4118 TGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGC 4177 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || |||||||| | | || ||||||||||||| |||||||||||||||||||| Sbjct 4178 TTTCCAGCGAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTG 4237 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 |||||| || || ||||||||| | ||||||||||| ||||| || || || ||| Sbjct 4238 GCTTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTG 4297 Query 211092 AGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| || || | |||||| || Sbjct 4298 AGTGTCTTGACGAAGATCTGCATGTT 4323 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || ||||| || || |||||||| || || | ||||| | |||||| Sbjct 3822 AGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCT 3881 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| | | || |||||||| |||| || ||||||||| Sbjct 3882 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 3941 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || |||||||||||| | || ||||| || ||||| ||| Sbjct 3942 TGGATCTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 4001 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| ||||| | |||||| Sbjct 4002 TTACCAGTGAGTGTCTTGACAAAGATCTGCAT 4033 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || ||||| || || |||||||| || || | ||||| | || || Sbjct 8947 AGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCC 9006 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| | | || || || || |||| ||||| |||||| Sbjct 9007 TCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCC 9066 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||||||| |||||||||||| | |||||||| || ||||| || Sbjct 9067 TGGATCTTAGCTTTCACGTTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTT 9126 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 9127 TTACCAGTGAGTGTCTTGACGAAGATCTGCAT 9158 Score = 132 bits (146), Expect = 1e-25 Identities = 135/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || ||||| || || |||||||| || || | ||||| | || ||| Sbjct 9175 AGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCT 9234 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| | | || |||||||| |||| ||||| |||||| Sbjct 9235 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 9294 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||||| || || || ||||||||||| | |||||||| || ||||| Sbjct 9295 TGGATCTTAGCCTTGACATTCTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGAT 9350 Score = 116 bits (128), Expect = 9e-21 Identities = 127/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 210949 GGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 |||| | |||||||||||||||||||| |||||||| | | || ||||| || |||| Sbjct 9647 GGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAA 9706 Query 211009 CTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCT 211068 ||||| ||||||||||| || || || || || ||||||||| | || |||| Sbjct 9707 TGCCTTCTTTGTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCT 9766 Query 211069 CGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 | || ||||| ||||| || || || || || ||||| | |||||| || Sbjct 9767 CTAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCATGTT 9815 Score = 96.9 bits (106), Expect = 8e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 210979 CGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCA 211038 ||||||| | | || ||||| || |||| || |||||||||||||| ||| || | Sbjct 8795 CGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATTTTTGCCTTGA 8854 Query 211039 CGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCT 211098 | || || ||||||||| | |||||||| |||||||| ||||| || ||||| |||| Sbjct 8855 CATTCTCAATGGTGTCACTGGGCTCAACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCT 8914 Query 211099 TTACAAACACCTGCAT 211114 | || || | |||||| Sbjct 8915 TGACGAAGATCTGCAT 8930 >SEQ16359 Length=2539 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 2528 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCT 2469 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || ||||| || ||||| ||||||||||| | ||||| |||||| Sbjct 2468 TCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCC 2409 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| |||||| || ||||||||||| | || ||||| || ||||| || Sbjct 2408 TGGATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTT 2349 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || ||||| ||||| | |||||| || Sbjct 2348 TTACCAGTCAGGGTCTTCACAAAGATCTGCATCTT 2314 >seq1673 Length=142529 Score = 167 bits (184), Expect = 5e-36 Identities = 172/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | || || ||||| || |||||||| || |||||||| || || | || Sbjct 264 TCCACGGAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAG 205 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | ||||||||||||||||| || || ||||| || | || ||||||||||| | Sbjct 204 GGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGAT 145 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||||| ||||| ||||||||| |||||| || || |||||||| | || ||||| Sbjct 144 GCCTTCTTTGTCTTGGATCTTTGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTC 85 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| || ||||| ||||| ||||| | |||||| Sbjct 84 CAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 40 >seq510 Length=807390 Score = 125 bits (138), Expect = 2e-23 Identities = 119/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 |||||||| || || ||||| || ||||| ||||||||||| | ||||| ||||||||| Sbjct 1575 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 1634 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 |||||| |||||| || ||||||||||| | || ||||| || ||||| || || Sbjct 1635 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 1694 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || ||||| ||||| | |||||| || Sbjct 1695 CCAGTCAGGGTCTTCACAAAGATCTGCATCTT 1726 Score = 125 bits (138), Expect = 2e-23 Identities = 119/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 |||||||| || || ||||| || ||||| ||||||||||| | ||||| ||||||||| Sbjct 4235 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 4294 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 |||||| |||||| || ||||||||||| | || ||||| || ||||| || || Sbjct 4295 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 4354 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || ||||| ||||| | |||||| || Sbjct 4355 CCAGTCAGGGTCTTCACAAAGATCTGCATCTT 4386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158700302373110