Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq251 129 5e-25 seq738 86.0 5e-12 >seq251 Length=594084 Score = 129 bits (142), Expect = 5e-25 Identities = 127/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || || | ||| || |||||||| || || || | ||||||||||||||| || || Sbjct 586422 AGTCCTGTAATGTGTGCGATCATGTAGGTCAGAAGTGCGTAGCTGGCGATGTTGAAAGGA 586481 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || || ||||| || ||||| | |||||| ||||| || || ||||| || || | Sbjct 586482 ACTCCCAGACCCATATCACCTGAGCGCTGGTACAGCTGACAGGACAGCTCACCATCACAG 586541 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAG 29877 ||||| |||||||| | ||| ||||| ||||| || |||||||| Sbjct 586542 ACGTAGAACTGACAGAGGGCGTGGCAGGGAGGCAGAGCCATGAG 586585 Score = 125 bits (138), Expect = 6e-24 Identities = 123/156 (79%), Gaps = 7/156 (4%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTC---G 30073 || || ||||||||||| || ||||||||||||||||| ||||| || | |||| | Sbjct 587615 AAGTGTCTCCACTGGAAGCCATACACCGGTCCCAGGTCGCCCTCCTCTC---GCTCTGTG 587671 Query 30074 AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTC 30133 |||||| ||||||| ||||| | ||| |||||||| ||||||||||| ||||| ||| Sbjct 587672 AAGCCCAGATTGTCCAGGAAGTCCCGGGACCCGTTGGCATCCCAGATCTTCACCCCTTTC 587731 Query 30134 TCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 30168 || || ||||| |||| || || || |||| |||| Sbjct 587732 TCTGACAGCTCCTTGGCATTAGTTGATCCCTGTGAC 587767 >seq738 Length=479450 Score = 86.0 bits (94), Expect = 5e-12 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 114443 AGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACGCT 114502 |||| || |||||||| ||||| | ||| || ||||| || |||| ||| |||||| | Sbjct 290664 AGTCGAACAGGATGCCAGGGCAGGTTTCCATTTTTCCCAATACCCAGGTCAGGACACAAT 290723 Query 114503 GCCACGATACCGTTCAGAATGAGGGGCATG 114532 ||||||||||||||||| ||| ||| |||| Sbjct 290724 GCCACGATACCGTTCAGGATGCGGGACATG 290753 Score = 82.4 bits (90), Expect = 6e-11 Identities = 92/121 (76%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 114042 ACTCTGGCAGTAGACGATATCTCTCTAGACTTTTCTCTGGGAGAAAAATGTCGCACGCAA 114101 ||||||||| |||||||||| | ||| |||| | || |||| || |||| ||| ||| Sbjct 283840 ACTCTGGCAATAGACGATATTTTTCTGGACTGATTTCAGGGAAGAATGTGTCACACTCAA 283899 Query 114102 ATTGCGTC--GACACGTGAGTGACAAACAGCCTCTTTGTCCCCGGGCTCTCCATGAGCTC 114159 | ||| || || |||| ||||||| || ||| | || |||||||||||||| | ||| Sbjct 283900 ACTGCTTCAGGATTCGTG--TGACAAATAGTCTCCTGGTTCCCGGGCTCTCCATCAACTC 283957 Query 114160 C 114160 | Sbjct 283958 C 283958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406012647232804