Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq251 147 2e-30 seq638 134 1e-26 >seq251 Length=594084 Score = 147 bits (162), Expect = 2e-30 Identities = 137/174 (79%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || || | ||| || |||||||| || || || | ||||||||||||||| || || Sbjct 586422 AGTCCTGTAATGTGTGCGATCATGTAGGTCAGAAGTGCGTAGCTGGCGATGTTGAAAGGA 586481 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || || ||||| || || || | |||||| |||||||| || ||||| ||||| | Sbjct 586482 ACTCCCAGACCCATATCACCTGAGCGCTGGTACAGCTGACAGGACAGCTCACCATCACAG 586541 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 27381 ||||| |||||||| | ||||||||| ||||| |||||||||||| || |||| Sbjct 586542 ACGTAGAACTGACAGAGGGCGTGGCAGGGAGGCAGAGCCATGAGGGGCAGGTCT 586595 Score = 143 bits (158), Expect = 2e-29 Identities = 140/178 (79%), Gaps = 7/178 (4%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 |||||| |||||||||| || || || ||||| ||||| || ||||||||||||||||| Sbjct 587593 CATGTCTTTGTACTCTGCACCAAAGTGTCTCCACTGGAAGCCATACACCGGTCCCAGGTC 587652 Query 27549 TCCCTCTTCCCTGTGCTC---GAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGC 27605 ||||| || | |||| ||||||| ||||||| ||||| | ||| |||||||| Sbjct 587653 GCCCTCCTCTC---GCTCTGTGAAGCCCAGATTGTCCAGGAAGTCCCGGGACCCGTTGGC 587709 Query 27606 GTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 27662 ||||||||||| ||||| ||||| || ||||| |||| || || || |||| |||| Sbjct 587710 ATCCCAGATCTTCACCCCTTTCTCTGACAGCTCCTTGGCATTAGTTGATCCCTGTGAC 587767 >seq638 Length=541635 Score = 134 bits (148), Expect = 1e-26 Identities = 176/244 (72%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 69074 GGTGAACGGATGGGGAAAGTTTTATATCCCCACCGCCGTGACGATGCAGGTCATCGGTTA 69133 ||||||||| ||||||||||| || | ||| |||| |||||||| | ||| Sbjct 99985 GGTGAACGGGTGGGGAAAGTTCTACCTTCCCGAAATGGTGAACATGCAGGTTGTAGGTGT 100044 Query 69134 TGTGACGGGAACTCCATACCAATGTGACCAGCTTGTCCTGATGACCTGCGAGGACCAGAA 69193 ||| |||||| ||| | ||||||||||||||| |||||||| || |||||| | Sbjct 100045 GGTGGAGGGAACATCATGTCCATGTGACCAGCTTGTTCTGATGACATGTGAGGACAAACG 100104 Query 69194 GGTGTACGGCTATGACGGAGACGAGCTGCATGTGGTGGCTAACTGTCTGGATCAGATGGG 69253 | |||||| ||| || ||||| ||||||||| |||||||| ||||| | | | Sbjct 100105 GCTGTACGCCTACGATGGAGAGGAGCTGCATCTGGTGGCTCCAAGTCTGAAGCGACTCTT 100164 Query 69254 GGAAGAAGGAATAGCCTATCCTGCATTCCAGAGCTATTATCATGGGGAGGCCTTCAAACA 69313 || | | ||||| ||||| |||| | ||||||| || | |||||||||||| | | Sbjct 100165 TGACAAGGAAATAGAATATCCAGCATCCAAGAGCTACTACAACGGGGAGGCCTTCGATGA 100224 Query 69314 TATG 69317 |||| Sbjct 100225 TATG 100228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369370234535234