Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq49 471 6e-128 seq56 114 2e-20 >seq49 Length=1117640 Score = 471 bits (522), Expect = 6e-128 Identities = 1292/1964 (66%), Gaps = 29/1964 (1%) Strand=Plus/Minus Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120 ||||| || || || ||||||| | ||||| || | || | || |||||||| || Sbjct 732473 TTCTTCATCTCCTCGTTCCACAGTCCTCTCTCCGTCAGGTCTTTGAGCAGATGAGGGTTG 732414 Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180 || || ||||| ||||| |||| || || || ||||| || || ||||| || | ||| Sbjct 732413 ACGATCTGAAACTCTCCCGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCG 732354 Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240 | || || ||||| |||| || || || || || || || ||||| || |||| || Sbjct 732353 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGCAGC 732294 Query 77241 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 77300 | || || || | |||||| | |||||| || || || ||||| ||||| ||| Sbjct 732293 AGGCTGTTCCTCACGCCATGTTTGGCGATTTTCTCCTTCAGCAGCTTCCAGTCCCAGAGA 732234 Query 77301 TCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCA 77360 || | || ||||| | ||||| || || || || || || | || || Sbjct 732233 TCGGTCGGCGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACCGGGGAGCCC 732174 Query 77361 TTATATGTTTCATAAGGTCCT---TCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCT 77417 | || || || || || || || | | || || || || ||||| |||| || Sbjct 732173 TCGTACGTCTCGTAGGGGCCGAGCTCGG---CCGCCAGCTCGCAGCTCGCCTCCAGAGCG 732117 Query 77418 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAAC 77477 |||| ||||| |||||||| || | | ||||| ||| || || || |||||| Sbjct 732116 GCGTAGTAAATGGTTTCGAAGATGTGGATGTTGAGCAGTTGAGCCTCTGGGCTTTCAAAC 732057 Query 77478 GGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTA 77537 || | | | | ||||| ||||| || ||||| ||||| ||||| || || || || || Sbjct 732056 GGGTGACGCATGAGAATGAAGGCGTCGGCTAAACCCTGGACTCCGATTCCGATCGGCCTG 731997 Query 77538 TGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTA 77597 || | ||| || || | | ||||| || | || || || || || || ||||| || Sbjct 731996 TGGCGCTTGTTCGAGTTCTCGGCTTCCGGTACCGGGTAGTAGTTGATCTCGATAATCTTG 731937 Query 77598 TTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCA 77657 || || ||| | || | |||||| ||| | ||||| ||||||||| | | Sbjct 731936 TTCAGGTTTTTGACGATTACTTTGGTCACATATGCCAGTTTCTTAAAATCAAAAGTCCGC 731877 Query 77658 TCTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTA 77714 ||| | || ||||||| | || || || || || ||||| || |||||||| | Sbjct 731876 TCTGGGGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTACAGACCGCTACCTCGTCC 731817 Query 77715 GCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTT 77774 | ||| |||| | || ||||| || || || || || || || ||||||||||| Sbjct 731816 TTGCTGGTGTATTCAACAATTTCGGTGCACAGGTTGCTGCACTTTATGGTGCCCAGATTC 731757 Query 77775 TGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCA 77834 || ||||||||||| | ||||| | ||| || || || || | || || || || || Sbjct 731756 TGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTATGGCGTTCCAGTCTCT 731697 Query 77835 ATCTGTGATTCGATAATAGATTTCCAGA-CGACTCTAGCTTTTATCATA-GATTTGTATC 77892 |||| || || || || | | ||| | | || ||| || | || | | || | | Sbjct 731696 GTCTGCGACTCAATGATGGCGTACCACAGCTGCT-GAGCCTTCACCACACGCTTGGCCTT 731638 Query 77893 GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCA 77952 ||| ||| | ||||| || || ||| ||||| || || ||||| ||||||| Sbjct 731637 GCC-CTCCTTCTCATACCTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCATCCA 731579 Query 77953 ATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCA 78012 |||||||| | || || ||||||| |||||||| | || |||| |||| Sbjct 731578 GACCAGGGCAGGCGTTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACTCTCTTCA 731519 Query 78013 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTC 78072 | || |||||||| ||||| | || || || |||| || || || || || |||| Sbjct 731518 TGAACAGATCAGGGATCCACATGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTC 731459 Query 78073 CTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 78132 |||| ||||| || || || || || || | | ||| | ||||| || ||||| || | Sbjct 731458 CTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCAAAGTGCCAGGGCTCTAGGTACA 731399 Query 78133 TTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTAT 78192 | || | |||| |||| || || || ||||| || | || | || ||||| || | Sbjct 731398 TGGCGAAGGCTCCGGGTCTCTTGTTGCCCCCCTGGTCGACGTAGCGTGCCGTGTTGTTGT 731339 Query 78193 AAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTC 78252 ||||||||| ||| || | | ||||| || |||| || || ||||| || || || | Sbjct 731338 AAACTCTCAGCATGGGGACGAGCCCGTTGGAGTTTCCGTTGGTGCCAGAGATGTAGCTCC 731279 Query 78253 CACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312 | | | | || || | | | || || ||||| || ||| || || || | Sbjct 731278 CTGTAGATCTGATGCAGCTGACCGCCACACCGATGCCTCCAGCTGACTTGGAGATGAGGG 731219 Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAA 78372 | || | |||| || |||||||| || || || ||||| ||| ||||| || || | Sbjct 731218 CACACTGCTTCAGCGTGTCGTAGATGCCTTCAATGCTGTCGTCCTTCATGGCGAGCAGGA 731159 Query 78373 AACAGCTAGACATTTGA----TGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCA 78428 | ||||| |||| ||| || || || || || || || | ||||| || || Sbjct 731158 AGCAGCTGGACAGCTGAGGCCTGTTG----GTCCCAGCGTTGAAGAGAGTCGGGGAGGCG 731103 Query 78429 TGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCAT 78488 || || ||||| || || || || || ||||| || ||||| |||| || || ||| Sbjct 731102 TGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTCTCAATCGCTGCATCGATATCCGTC 731043 Query 78489 TGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTA 78548 | || |||||||| | || | ||| | ||| ||||| |||| || || || Sbjct 731042 TTGTGGATTCCTACAGAGACTCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGCCG 730983 Query 78549 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 78608 || || |||| || ||| || |||| ||| || || || || ||||||| || || Sbjct 730982 TTGATCTTCAGCAGGTACGAACGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTAGGAGAAA 730923 Query 78609 TCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCATG 78668 |||| ||||| || || || || ||| ||||||| || ||| || | || | Sbjct 730922 TCTCGGTCGTAGATTATGGACGAGTTGAGTCGGTCTTTGTTTTCTAGAACGATGT-CAAG 730864 Query 78669 ACAGTAGTT-GAAATAATAGGAGATCGTACACCATTTTTA--GGATTAACATAGTTAAAT 78725 | || || || ||||| || || | || | || || | ||||| | Sbjct 730863 CGTCTCCTTGGAGATCATAGGTGA--GTGGCGTTTGTTCAGGGGGTTGATGTAGTTGTAC 730806 Query 78726 AAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCT 78785 | || ||||| || || || || | ||| || || || ||||| || || || || || Sbjct 730805 AGGTCCTCCATCACGTCGCTGAACACTTTCTTAGTCTCTTTGTGCAGGTTGGAGACGGCG 730746 Query 78786 ATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCT 78845 || | ||||| || || || || || || |||| || || ||||| || || ||| Sbjct 730745 ATCCGAGCAGCGAGGATGGCGTAGTCGGGGTGTTTAGTTGTGAGCGTGGCAGCGATCTCT 730686 Query 78846 GCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTC 78905 || || | | || | ||| | ||| ||||| || | || || || || || || ||| Sbjct 730685 GCTGCCAGCGTGTCGAGCTCCACAGTGGTGACTCCGCTGTACAGACCCTGGATCACCTTC 730626 Query 78906 ATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCT-AAT 78964 |||| ||| | | | || || ||||| |||| ||||| || || || || |||| || Sbjct 730625 ATGGTGATCTGGGCCGGGTCCACAAAGTCAGAGTTCAGCCCGTAGCA-AAGCTTCTGGAT 730567 Query 78965 ACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008 ||||| |||||||| || || || || |||| || ||||| Sbjct 730566 GCGAGAGGTGATTTTGTCGAACATGACGCGTTCCTGGCGTCCAT 730523 >seq56 Length=1093683 Score = 114 bits (126), Expect = 2e-20 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 77724 TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTG 77783 |||| || ||||| || || || || ||| ||||||| |||||||||||||| |||||| Sbjct 335794 TATTCTACGATCTCTGTGCACAGGTTGCTAGATTTGATGGTGCCCAGATTTTGCTGGTTG 335853 Query 77784 CTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGAT 77843 ||||| | ||||| | |||||| || || || |||| ||||||||||| ||||||| Sbjct 335854 CTCTTCCTGTTGCAGGCGTCCTTGTACAGCATGTACGGTGTCCCGGTTTCTGTCTGTGAC 335913 Query 77844 TCGATAAT 77851 ||||| || Sbjct 335914 TCGATGAT 335921 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/200 (70%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 77364 TATGTTTCATAAGGTCCTTCTGTTTCAGCT---AGTTCACAACTCGCTTCCAATGCTCCG 77420 || ||||||||||| || | |||||| ||||||||||| || |||| || || Sbjct 335228 TAGGTTTCATAAGGGCCGAC---CTCAGCTGCCAGTTCACAACTGGCCTCCAGAGCGGCG 335284 Query 77421 TAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGA 77480 || || || || || || |||| | ||||| || || || || ||||| ||| Sbjct 335285 TAGTAGATGGTCTCAAAGATCTGAATGTTGAGTAACTGGGCCTCTGGGCTTTCAAATGGA 335344 Query 77481 TAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGT 77540 ||| | | ||| || |||||||| || | |||||| || || || ||||| || || || Sbjct 335345 TAACGCATAAGGATGAAGGCATCAGCCAGTCCCTGCACACCGATTCCAATTGGCCTGTGA 335404 Query 77541 CTCTTATTGGAAATTTTAGC 77560 | ||| || ||| ||| ||| Sbjct 335405 CGCTTGTTAGAATTTTCAGC 335424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694404704288960