Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq49 511 7e-140 seq56 96.9 5e-15 >seq49 Length=1117640 Score = 511 bits (566), Expect = 7e-140 Identities = 1292/1949 (66%), Gaps = 33/1949 (2%) Strand=Plus/Minus Query 75656 TTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 75715 ||||| ||||| || ||||||| | |||||| || | || | || |||||||| || Sbjct 732473 TTCTTCATCTCCTCGTTCCACAGTCCTCTCTCCGTCAGGTCTTTGAGCAGATGAGGGTTG 732414 Query 75716 ACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCC 75775 || || ||||| ||||| |||| || || || ||||| || || ||||| || | ||| Sbjct 732413 ACGATCTGAAACTCTCCCGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCG 732354 Query 75776 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAAT 75835 | || || ||||| |||| || || || || || || || ||||| || |||| || Sbjct 732353 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGCAGC 732294 Query 75836 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 75895 | || || || | |||||| | |||||| || || || ||||| ||||| ||| Sbjct 732293 AGGCTGTTCCTCACGCCATGTTTGGCGATTTTCTCCTTCAGCAGCTTCCAGTCCCAGAGA 732234 Query 75896 TCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCA 75955 || | || ||||| | ||||| || || || || ||||| | || || Sbjct 732233 TCGGTCGGCGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACCGGGGAGCCC 732174 Query 75956 TTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCG 76015 | || || ||||| | ||| || | || || ||||| |||||||| | || || Sbjct 732173 TCGTACGTCTCGTAGGGGCCGAGCTCGGCCGCCAGCTCGCAGCTCGCCTCCAGAGCGGCG 732114 Query 76016 TAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGA 76075 || ||||| |||||||| || | | || || ||| || || | || ||||| || Sbjct 732113 TAGTAAATGGTTTCGAAGATGTGGATGTTGAGCAGTTGAGCCTCTGGGCTTTCAAACGGG 732054 Query 76076 TAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGT 76135 | | | | ||||| || || || |||| ||||| ||||| || || || || || || Sbjct 732053 TGACGCATGAGAATGAAGGCGTCGGCTAAACCCTGGACTCCGATTCCGATCGGCCTGTGG 731994 Query 76136 CTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTG 76195 | ||| || || | || ||||| || | ||||| || || || || ||||| || || Sbjct 731993 CGCTTGTTCGAGTTCTCGGCTTCCGGTACCGGGTAGTAGTTGATCTCGATAATCTTGTTC 731934 Query 76196 AGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCT 76255 || ||| |||| | |||||| ||| | ||||| ||||||||| | | ||| Sbjct 731933 AGGTTTTTGACGATTACTTTGGTCACATATGCCAGTTTCTTAAAATCAAAAGTCCGCTCT 731874 Query 76256 A---TCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCAT--TAG 76310 | || |||| || || || || || || || ||||| || |||||||| | | | Sbjct 731873 GGGGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTACAGACCGCTACCTCGTCCTTG 731814 Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370 | ||| |||| | || || ||||| || || || ||||| || || || ||||| | Sbjct 731813 C--TGGTGTATTCAACAATTTCGGTGCACAGGTTGCTGCACTTTATGGTGCCCAGATTCT 731756 Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAA 76430 | ||||||||||| |||| || | ||| || || || | | || |||||||| || Sbjct 731755 GCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTATGGCGTTCCAGTCTCTG 731696 Query 76431 TCTGTGATTCGATAATAGATTTCCAGA-CGACTCTAGCTTTTATTATA-GATTTGTATCG 76488 |||| || || || || | | ||| | | || ||| || | | | | || | | | Sbjct 731695 TCTGCGACTCAATGATGGCGTACCACAGCTGCT-GAGCCTTCACCACACGCTTGGCCTTG 731637 Query 76489 CTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAA 76548 | ||| | ||||| || || | | ||||| || || ||||| ||||||| Sbjct 731636 C-CCTCCTTCTCATACCTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCATCCAG 731578 Query 76549 ACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCAT 76608 |||||| || | || |||||||||| ||||| || | || || | ||||| Sbjct 731577 ACCAGGGCAGGCGTTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACTCTCTTCAT 731518 Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668 || |||||||| ||||| | || || || |||| || || | || || ||||| Sbjct 731517 GAACAGATCAGGGATCCACATGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCC 731458 Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728 ||| ||||| || || || ||||| || | | ||| | ||||| || ||||| || || Sbjct 731457 TGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCAAAGTGCCAGGGCTCTAGGTACAT 731398 Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788 || | | || |||| || || || ||||| || | || | || ||||| || || Sbjct 731397 GGCGAAGGCTCCGGGTCTCTTGTTGCCCCCCTGGTCGACGTAGCGTGCCGTGTTGTTGTA 731338 Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848 |||||||| ||| || | | ||||| || | || || || ||||| || || || || Sbjct 731337 AACTCTCAGCATGGGGACGAGCCCGTTGGAGTTTCCGTTGGTGCCAGAGATGTAGCTCCC 731278 Query 76849 ACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGC 76908 | | || || | | | || || ||||| || || ||||| || || Sbjct 731277 TGTAGATCTGATGCAGCTGACCGCCACACCGATGCCTCCAGCTGACTTGGAGATGAGGGC 731218 Query 76909 ACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAA 76968 ||| | |||| ||||| |||||||| || || || || ||| ||||| || || || Sbjct 731217 ACACTGCTTCAGCGTGTCGTAGATGCCTTCAATGCTGTCGTCCTTCATGGCGAGCAGGAA 731158 Query 76969 ACAGCTAGACATTTGA----TGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCAT 77024 ||||| |||| ||| || || || || || || || | || || || || | Sbjct 731157 GCAGCTGGACAGCTGAGGCCTGTTG----GTCCCAGCGTTGAAGAGAGTCGGGGAGGCGT 731102 Query 77025 GAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATT 77084 | |||||||| || || || || || ||||| || ||||| |||| || |||||| | Sbjct 731101 GGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTCTCAATCGCTGCATCGATATCCGTCT 731042 Query 77085 GATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTAT 77144 || |||||||||| ||| | ||| | ||| ||||| ||||| || | || | Sbjct 731041 TGTGGATTCCTACAGAGACTCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGCCGT 730982 Query 77145 TTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 77204 | || |||| || ||| || |||| ||| || || || || ||||||| || || | Sbjct 730981 TGATCTTCAGCAGGTACGAACGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTAGGAGAAAT 730922 Query 77205 CTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATC---CA 77261 ||| ||||| || || ||| || ||| ||| || | || ||| || || | Sbjct 730921 CTCGGTCGTAGATTATGGACGAGTTGAGTCGGTCTTTGTTTTCTAGAACGATGTCAAGCG 730862 Query 77262 TGACAGTGGTAGAAATAATTGGAGA-TCGTATTCCATTTTTA--GGATTAACATAGTTAA 77318 | | || || || || || || | | || | || | || || | ||||| Sbjct 730861 TCTCCTTG---GAGATCATAGGTGAGTGGCGTT---TGTTCAGGGGGTTGATGTAGTTGT 730808 Query 77319 ATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGG 77378 | | ||| ||||| |||||||| || | ||| || || || ||||| || || || |||| Sbjct 730807 ACAGGTCCTCCATCACGTCGCTGAACACTTTCTTAGTCTCTTTGTGCAGGTTGGAGACGG 730748 Query 77379 CTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTT 77438 | || | |||||| || || || ||||| || |||| || ||| ||||| || || | Sbjct 730747 CGATCCGAGCAGCGAGGATGGCGTAGTCGGGGTGTTTAGTTGTGAGCGTGGCAGCGATCT 730688 Query 77439 CTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTT 77498 |||| || | || || | || | ||| || |||||| | || || || || || || | Sbjct 730687 CTGCTGCCAGCGTGTCGAGCTCCACAGTGGTGACTCCGCTGTACAGACCCTGGATCACCT 730628 Query 77499 TCATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCT-A 77557 |||||| || | | || || ||||| || | ||||| || || || || |||| Sbjct 730627 TCATGGTGATCTGGGCCGGGTCCACAAAGTCAGAGTTCAGCCCGTAGCA-AAGCTTCTGG 730569 Query 77558 ATACGAGATGTGATTTTATCAAACATGAC 77586 || ||||| |||||||| || |||||||| Sbjct 730568 ATGCGAGAGGTGATTTTGTCGAACATGAC 730540 >seq56 Length=1093683 Score = 96.9 bits (106), Expect = 5e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 || || | ||| || ||||| ||||| || || || || || || | ||||| || ||| Sbjct 338078 CTGAACACTTTCTTGGTTTCTTTGTGCAGGTTAGAAACTGCGATCCGTGCAGCCAGGATT 338137 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 |||||||||||||||| || ||| |||||| ||| | ||||| || | ||| || | Sbjct 338138 GCATAGTCAGGATGTTTAGTGGTGAGGGTGGCCGCTGTCTCTGCTGCCAGAGTGTCCAGC 338197 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 || | ||| || ||||| | || || || || || || ||||||| Sbjct 338198 TCCACAGTGGTGACTCCACTGTACAGACCCTGGATCACCTTCATGG 338243 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 76319 TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTG 76378 |||| || ||||| ||||| || || ||| | ||||| || || |||||||| |||||| Sbjct 335794 TATTCTACGATCTCTGTGCACAGGTTGCTAGATTTGATGGTGCCCAGATTTTGCTGGTTG 335853 Query 76379 CTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGAT 76438 ||||| |||| || | |||||| || || | |||| || || ||||| ||||||| Sbjct 335854 CTCTTCCTGTTGCAGGCGTCCTTGTACAGCATGTACGGTGTCCCGGTTTCTGTCTGTGAC 335913 Query 76439 TCGATAAT 76446 ||||| || Sbjct 335914 TCGATGAT 335921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712663360164480