Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1673 116 9e-21 seq365 114 3e-20 SEQ16359 104 5e-17 seq49 93.3 1e-13 >seq1673 Length=142529 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || ||||| || ||||||||||| || | | || | |||||| Sbjct 251 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 192 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| |||||||||||||| | | ||| ||||| || ||| Sbjct 191 TCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTGTCT 132 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || ||| ||| ||| |||| | | |||| ||| || || || || || || Sbjct 131 TGGATCTTTGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 72 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| |||||||| |||| |||||| Sbjct 71 TTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 40 >seq365 Length=500478 Score = 114 bits (126), Expect = 3e-20 Identities = 154/211 (73%), Gaps = 10/211 (5%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GC 151959 || || || || ||||||||||||||||| || | | || | |||||||| || || Sbjct 4118 TGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGC 4177 Query 151960 TTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTT 152019 ||| || |||||||| | |||||||||||| | | || |||||||| || || || | Sbjct 4178 TTT--CCAGCGAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCT 4235 Query 152020 TTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| ||| |||| | | |||| ||| ||| || || || || || ||||| | Sbjct 4236 TGGCTTTCACATTCTCAATGGTGTC---ACTGGGCTCAACCTCGAGGGTGATGGTTTTAC 4292 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | ||||| ||||| ||||||| |||||| || Sbjct 4293 CAGTGAGTGTCTTGACGAAGATCTGCATGTT 4323 Score = 91.5 bits (100), Expect = 3e-13 Identities = 150/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| || || || || || || ||||||||||| || | | || | |||||| Sbjct 3822 AGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCT 3881 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| | |||||||||||| | | || || ||||| || Sbjct 3882 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 3941 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || |||||| |||| | | |||| ||| ||| || || || || || Sbjct 3942 TGGATCTTAGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 3998 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| ||||| || |||| |||||| Sbjct 3999 GTCTTACCAGTGAGTGTCTTGACAAAGATCTGCAT 4033 Score = 91.5 bits (100), Expect = 3e-13 Identities = 150/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || || || || ||||||||||| || | | || | || || Sbjct 8947 AGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCC 9006 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| | ||||||||| || | | || ||||| || || Sbjct 9007 TCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCC 9066 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||| || |||| | | |||| ||| ||| || || || || || Sbjct 9067 TGGATCTTAGCTTTCACGTTCTCGATGGTGTC---ACTGGGCTCAACCTCCAGGGTGATG 9123 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || ||||| ||||| ||||||| |||||| Sbjct 9124 GTTTTACCAGTGAGTGTCTTGACGAAGATCTGCAT 9158 Score = 89.7 bits (98), Expect = 1e-12 Identities = 104/139 (75%), Gaps = 6/139 (4%) Strand=Plus/Plus Query 151969 CGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGA 152028 ||||||| | |||||||||||| | | || || ||||| || || |||||| |||| Sbjct 8795 CGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATTTTTGCCTTGA 8854 Query 152029 CAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085 || |||| | | |||| ||| ||| || || ||||| || || ||||| ||||| | Sbjct 8855 CATTCTCAATGGTGTC---ACTGGGCTCAACCTCCAGAGTGATGGTCTTGCCAGTGAGGG 8911 Query 152086 TCTTCACGAAGACCTGCAT 152104 |||| ||||||| |||||| Sbjct 8912 TCTTGACGAAGATCTGCAT 8930 >SEQ16359 Length=2539 Score = 104 bits (114), Expect = 5e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || ||||| || ||||||||||| |||| | || | |||||| Sbjct 2528 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCT 2469 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 ||||| || || || ||||| || | |||||||| | | ||| ||||| || || Sbjct 2468 TCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCC 2409 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || ||| ||| ||| |||| | | |||| ||| || || || || || ||| Sbjct 2408 TGGATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTT 2349 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || |||||||| |||| |||||| || Sbjct 2348 TTACCAGTCAGGGTCTTCACAAAGATCTGCATCTT 2314 >seq49 Length=1117640 Score = 93.3 bits (102), Expect = 1e-13 Identities = 182/265 (69%), Gaps = 8/265 (3%) Strand=Plus/Plus Query 115613 GAGGGCAAGGGAGATTTTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAA 115672 |||||| || || ||||||| ||||| |||| ||||||| || |||||| |||| | Sbjct 731472 GAGGGCCAGAGACCTTTTCTACGCCATGTGGATCCCTGATCTGTTCATGAAGAGAGTGGA 731531 Query 115673 G-GCAAAC-GGAATGTGGAGCCTCT--TTTGTCCCAATGAAGCCCCTGGTCTTGATGATG 115728 | |||| | ||| || | |||| | |||||||| | ||||||||| ||||| Sbjct 731532 GAGCAACCAGGACTG----GTCTCTGATGTGTCCCAACGCCTGCCCTGGTCTGGATGAGT 731587 Query 115729 TTTATGGTCCAGAGTTTGAGAATCTTTACGAAAGGTACGAGAAAGAGGGAAGAGCCAAAA 115788 | || ||||||||||| || ||| ||||| ||||| ||||| | ||||| Sbjct 731588 GCTGGGGGGAGGAGTTTGAGAAGCTCTACACCAGGTATGAGAAGGAGGGCAAGGCCAAGC 731647 Query 115789 GGGTTGTGAAGGCGCAAGACCTTTGGCATCATATCCTTGTCACACAGTCAGAGGTCGGAA 115848 | || |||||||| || | || ||| | ||| ||| | ||| ||||| |||| Sbjct 731648 GTGTGGTGAAGGCTCAGCAGCTGTGGTACGCCATCATTGAGTCGCAGACAGAGACTGGAA 731707 Query 115849 TGCCCTTTATTGCGTACAAAGATGC 115873 ||| | || ||||||||| || Sbjct 731708 CGCCATACATGCTGTACAAAGACGC 731732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153371179831794